New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4157696 =	43 (0.760)	3 (0.050)	3/258	NT	6.1%	coding (183/888 nt)	PP_3660	LysR family transcriptional regulator
	?	NC_002947	4157729 =	49 (0.870)					coding (150/888 nt)	PP_3660	LysR family transcriptional regulator

TGGTACTGGCGCCGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAGCTGTTCTGGGGTCA  >  NC_002947/4157581‑4157877                                                                                                                                                       |                                                                                                                                                     tGGTACTGGCGCCGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCa                                                                                                                                                      <  2:340410/149‑1 (MQ=255)    tACTGGCGCCGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGt                                                                                                                                                   >  7:97264/1‑149 (MQ=255)      cTGGCGCCGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTg                                                                                                                                                 <  5:97728/149‑1 (MQ=255)         gcgcCGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGt                                                                                                                                               >  4:330182/1‑148 (MQ=255)         acacggcaacatcagccatgcggcccaagccctgcacctgtctcagccggcggtgtccggccagctcaagctcttgcaagaggcgtttggcgagcccctttaccaacgtACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTgg                                                                                                                                                >  8:306217‑M1/110‑149 (MQ=255)           gcCGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTa                                                                                                                                              >  1:212703/1‑147 (MQ=255)           gcCGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTa                                                                                                                                              >  4:172862/1‑147 (MQ=255)            ccGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAg                                                                                                                                           <  3:135866/149‑1 (MQ=255)             cGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGCTCCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAg                                                                                                                                           <  1:102762/149‑1 (MQ=255)             cGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAgg                                                                                                                                          >  5:242519/1‑149 (MQ=255)                 gcgcACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGc                                                                                                                                       <  2:166258/148‑1 (MQ=255)                  cgcACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTc                                                                                                                                     <  2:212703/149‑1 (MQ=255)                         tGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAAc                                                                                                                              <  3:172862/149‑1 (MQ=255)                             gcgcTCCAGCCCGCGCATGGCCTCGCGCAACGCTTGCGCCTGCCGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCCCCGGCCGCTGTCCGCCGCCCGCCGCGGCCGGCACGTGGGTAAAGGGGCTCGCCTAACGCct                                                                                                                          >  1:210259/1‑149 (MQ=255)                              cgcTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCctc                                                                                                                         <  2:93235/149‑1 (MQ=255)                                 tCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTg                                                                                                                      >  3:181304/1‑149 (MQ=255)                                   cAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTg                                                                                                                      <  2:169642/147‑1 (MQ=255)                                               ggCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCGTCGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGc                                                                                                         >  1:64915/1‑149 (MQ=255)                                                     gcgcAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTg                                                                                                                                                 >  3:16914/1‑102 (MQ=255)                                                     gcgcAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTg                                                                                                                                                 <  4:16914/102‑1 (MQ=255)                                                      gccggcggtgtccggccagctcaagctcttgcaagaggcgtttggcgagcccctttaccaacgtACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTa                                                                                                                                              <  7:104143‑M1/42‑1 (MQ=255)                                                      gccggcggtgtccggccagctcaagctcttgcaagaggcgtttggcgagcccctttaccaacgtACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTa                                                                                                                                              >  8:104143‑M1/65‑106 (MQ=255)                                                                gcgcCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACAccgccg                                                                                         <  2:296963/147‑1 (MQ=255)                                                                    cTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCtt                                                                                                                       <  8:320371/113‑1 (MQ=255)                                                                    cTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCtt                                                                                                                       >  7:320371/1‑113 (MQ=255)                                                                     tGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTgaga                                                                                  >  4:252671/1‑149 (MQ=255)                                                                        cGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAg                                                                               <  2:64915/149‑1 (MQ=255)                                                                              gTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGTCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAg                                                                         <  3:330182/149‑1 (MQ=255)                                                                               tttCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAgg                                                                        <  3:252671/149‑1 (MQ=255)                                                                                   g‑cgcAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCtt                                                                    >  8:118561/1‑149 (MQ=255)                                                                                     cgcAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTg                                                                   <  4:181304/149‑1 (MQ=255)                                                                                          gcgcTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCg                                                              >  3:225444/1‑149 (MQ=255)                                                                                                 gCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCt                                                       <  7:118561/149‑1 (MQ=255)                                                                                                    tGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGAt                                                    <  8:97264/149‑1 (MQ=255)                                                                                                         ccAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTg                                                >  5:202271/1‑149 (MQ=255)                                                                                                          cAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGc                                               >  7:165451/1‑149 (MQ=255)                                                                                                            gCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCg                                             >  8:63483/1‑149 (MQ=255)                                                                                                             taccaacgtgccggccgcggcgtgcggctgacagcggccggtACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGc                                                                                       <  7:104143‑M2/64‑1 (MQ=255)                                                                                                             taccaacgtgccggccgcggcgtgcggctgacagcggccggtACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGc                                                                                       >  8:104143‑M2/43‑106 (MQ=255)                                                                                                               ccaacgtgccggccgcggcgtgcggctgacagcggccggtACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCgtgt                                          >  8:306217‑M2/41‑149 (MQ=255)                                                                                                                 tGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGcc                                                               >  5:331171/1‑126 (MQ=255)                                                                                                                 tGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGcc                                                               <  6:331171/126‑1 (MQ=255)                                                                                                                         ggCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAg                                                                               >  1:196702/1‑102 (MQ=255)                                                                                                                         ggCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAg                                                                               <  2:196702/102‑1 (MQ=255)                                                                                                                          gCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGtt                                                 >  7:7297/1‑131 (MQ=255)                                                                                                                          gCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGtt                                                 <  8:7297/131‑1 (MQ=255)                                                                                                                            cGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCACCCGTgg                             >  4:92131/1‑149 (MQ=255)                                                                                                                              cTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGc                            >  5:146122/1‑148 (MQ=255)                                                                                                                                 tCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAAc                        <  4:225444/149‑1 (MQ=255)                                                                                                                                  cAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCGAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCg                                       >  4:262424/1‑133 (MQ=255)                                                                                                                                  cAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCg                                       <  3:262424/133‑1 (MQ=255)                                                                                                                                   aGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGt                      >  7:293587/1‑149 (MQ=255)                                                                                                                                       gCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGTACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATc                  <  6:202271/149‑1 (MQ=255)                                                                                                                                        cACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCa                 <  7:63483/149‑1 (MQ=255)                                                                                                                                         aCGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAg                <  6:146122/149‑1 (MQ=255)                                                                                                                                           gccgcGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAGCt              >  2:183236/1‑149 (MQ=255)                                                                                                                                            ccgcGGCCGGCACGTTCGTAAAGCGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAGCTg             <  4:71606/149‑1 (MQ=255)                                                                                                                                                       aCGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAGCTGTTCTGGGGTCa  <  2:84457/149‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                     TGGTACTGGCGCCGATGCGCACGGTGCCGCGCTCCAGCCCGCGCATGGCCTCGCGCAGCGCTTGCGCCTGACGGAAGGTTTCG‑CGCAGGCGCTCGGCATGC‑GCCAGCAACTGCTCACCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAGCTGTTCTGGGGTCA  >  NC_002947/4157581‑4157877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.