New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4901030 =	50 (0.880)	3 (0.060)	3/248	NT	6.6%	coding (494/1533 nt)	PP_4309	NCS1 family transporter
	?	NC_002947	4901076 =	37 (0.680)					coding (540/1533 nt)	PP_4309	NCS1 family transporter

GCTGATCCGTGCCGTCATCGCCATCGCCTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTGGCGGTGTTCATGTACTTCAAGGCCGA  >  NC_002947/4900929‑4901219                                                                                                                                                    |                                                                                                                                                gcTGATCCGTGCCGTCATCGCCATCGCCTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCctgggctggg                                                                                                                                                <  1:69210/149‑1 (MQ=255)   tGATCCGTGCCGTCATCGCCATCGCCTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGgtg                                                                                                                                              >  8:111147/1‑149 (MQ=255)   aggatcacaggcccggcaaaggcctcgtaacggcgcaccatctccatgccgtaggccagtatcactatttttaacagccagatcgacacgaaacacaccCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGgtg                                                                                                                                              >  2:60683‑M1/100‑149 (MQ=255)         gTGCCGTCATCGCCATCGCCTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTc                                                                                                                                        <  2:187072/149‑1 (MQ=255)         gTGCCGTCATCGCCATCGCCTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTc                                                                                                                                        <  4:242456/149‑1 (MQ=255)              gTCATCGCCATCGCCTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTc                                                                                                                                   <  6:37820/149‑1 (MQ=255)              cccggcaaaggcctcgtaacggcgcaccatctccatgccgtaggccaggatcaccagctgcaccagccagatcgacacgaaacacaccCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCctgggctgg                                                                                                                                                 <  1:349038‑M1/47‑1 (MQ=255)              cccggcaaaggcctcgtaacggcgcaccatctccatgccgtaggccaggatcaccagctgcaccagccagatcgacacgaaacacaccCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCctgggctgg                                                                                                                                                 >  2:349038‑M1/89‑135 (MQ=255)                 atcgccatcgccTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGAt                                                                                                                                >  4:225812/1‑149 (MQ=255)                  tcgccatcgccTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATc                                                                                                                               >  5:154128/1‑149 (MQ=255)                      catcgccTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATctggc                                                                                                                           >  4:155308/1‑149 (MQ=255)                         cgccTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATctggctgg                                                                                                                        >  2:186692/1‑149 (MQ=255)                                         cAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCt                                                                                                        <  3:155308/149‑1 (MQ=255)                                          aGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCAGTTTGGACGCAAATAGCAGCCTACGACCACGAAAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTg                                                                                                       >  7:111934/1‑149 (MQ=255)                                            acctacctGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGc                                                                                                     <  1:186692/149‑1 (MQ=255)                                                 cctGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTAc                                                                                                 <  6:154128/148‑1 (MQ=255)                                                   tGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCt                                                                                                   <  1:123037/144‑1 (MQ=255)                                                   tGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCt                                                                                                   >  2:123037/1‑144 (MQ=255)                                                    ggCATCGGTAGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATctgg                                                                                                                            <  6:220340/118‑1 (MQ=255)                                                    ggCATCGGTAGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATctgg                                                                                                                            >  5:220340/1‑118 (MQ=255)                                                       aTCGGTGGTGCTGCGGGTGCTTCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTTGTGCAGCTGGTGATCCTGGCCTACGGCATgg                                                                                          <  6:114892/149‑1 (MQ=255)                                                       aTCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGCCCACGACAGCATCCTCGGCCTGTCGCGCCAGGGCTGGGTGTGGTTCGTGTCGATCTGGCTGGGGCAGCTGGTGCTCCTGGACTACGGCATgg                                                                                          >  8:299477/1‑149 (MQ=255)                                                        tCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGga                                                                                         <  7:111147/149‑1 (MQ=255)                                                                gctgcGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTgc                                                                                 >  5:341840/1‑149 (MQ=255)                                                                       gTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATg                                                                                           <  7:291166/132‑1 (MQ=255)                                                                       gTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATg                                                                                           >  8:291166/1‑132 (MQ=255)                                                                            gctCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACg                                                                                                <  8:331435/122‑1 (MQ=255)                                                                            gctCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACg                                                                                                >  7:331435/1‑122 (MQ=255)                                                                                 ccgccgTTTGGCAGTAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCttt                                                                >  2:181760/1‑149 (MQ=255)                                                                                  cgccgTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTg                                                               <  6:166360/149‑1 (MQ=255)                                                                                  cgccgTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTg                                                               >  3:165127/1‑149 (MQ=255)                                                                                    ccgTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGcc                                                             >  8:289283/1‑149 (MQ=255)                                                                                      gTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCgg                                                           <  7:289283/149‑1 (MQ=255)                                                                                      gTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGGCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCgg                                                           <  6:341840/149‑1 (MQ=255)                                                                                              gCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGa                                                   >  6:316432/1‑149 (MQ=255)                                                                                                  cacccagcccaggctcgacaggccgaggatgctgtcgtggtcgtaggctgGGTGTGTTTCGTGTCGATCTGGCTGTTAAAAATAGTGATACTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCct                                               >  2:60683‑M2/51‑149 (MQ=255)                                                                                                     ccagcccaggctcgacaggccgaggatgctgtcgtggtcgtaggctgGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCggg                                                          <  1:349038‑M2/88‑1 (MQ=255)                                                                                                     ccagcccaggctcgacaggccgaggatgctgtcgtggtcgtaggctgGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCggg                                                          >  2:349038‑M2/48‑135 (MQ=255)                                                                                                       AGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGa                                          <  8:35639‑M1/149‑1 (MQ=255)                                                                                                       AGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGa                                          <  8:30142‑M1/149‑1 (MQ=255)                                                                                                               aCCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCGGGGCCTGTGATCCTGCTGACCGTcgcc                                  <  8:111934/149‑1 (MQ=255)                                                                                                                 cACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGACCGTcgccg                                 >  2:232667/1‑148 (MQ=255)                                                                                                                     aCAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGTCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTg                            <  1:181760/149‑1 (MQ=255)                                                                                                                              tCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTGGCGGTGtt                    >  1:51871/1‑148 (MQ=255)                                                                                                                              tCGGCCTGTCGAGCCTGGGCTGGGGGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTGACGAGGCGTTTGCCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTGGCGGTGtt                    >  6:345381/1‑148 (MQ=255)                                                                                                                                  ccTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTGGCGGTGTTCATGt               <  4:165127/149‑1 (MQ=255)                                                                                                                                     gTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTGGCGGTGTTCATGTACt            >  7:40647/1‑149 (MQ=255)                                                                                                                                           ccTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCtg                                                      <  6:226493/101‑1 (MQ=255)                                                                                                                                           ccTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCtg                                                      <  6:221379/101‑1 (MQ=255)                                                                                                                                           ccTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCtg                                                      >  5:226493/1‑101 (MQ=255)                                                                                                                                           ccTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCtg                                                      >  5:221379/1‑101 (MQ=255)                                                                                                                                           ccTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGGGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTGGCGGTGTTCATGTACTTCAAgg      >  2:202593/1‑149 (MQ=255)                                                                                                                                            ctgggcggggGGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTGGCGGTGTTCATGTACTTCAAGGc     <  7:299477/149‑1 (MQ=255)                                                                                                                                               ggctgGGTGTGTTTCGGGTCGATCGGGCTGGTGCAGCGGGGGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGGGATCCTGCTGACCGTCGCCGCGCGGGCGGTGTTCATGTCCTGCAAGGCCGa  >  4:95441‑M2/6‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                GCTGATCCGTGCCGTCATCGCCATCGCCTGGTTCGGCATCCAGACCTACCTGGCATCGGTGGTGCTGCGGGTGCTGCTCACCGCCGTTTGGCCGCAAATAGCAGCCTACGACCACGACAGCATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTTCGTGTCGATCTGGCTGGTGCAGCTGGTGATCCTGGCCTACGGCATGGAGATGGTGCGCCGTTACGAGGCCTTTGCCGGGCCTGTGATCCTGCTGACCGTCGCCGCACTGGCGGTGTTCATGTACTTCAAGGCCGA  >  NC_002947/4900929‑4901219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.