New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 566347764 (1.130)3 (0.060) 3/242 NT 5.0% coding (251/1179 nt) PP_4971 outer membrane‑bound lytic murein transglycolase A
?NC_002947 = 5663511 53 (1.000)coding (285/1179 nt) PP_4971 outer membrane‑bound lytic murein transglycolase A

CCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCTGAGCCAATCGGCAACCAAC  >  NC_002947/5663366‑5663649
                                                                                                                                                 |                                                                                                                                          
ccccGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCgcc                                                                                                                                         <  2:171180‑M2/149‑4 (MQ=255)
 cccGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCgccg                                                                                                                                        <  6:229564‑M2/149‑5 (MQ=255)
  ccGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCgccgc                                                                                                                                       >  5:101257‑M2/1‑144 (MQ=255)
        acgtGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCAGGTGTGGGCGGCCCCCTGCGACGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAgg                                                                                                                                 >  6:30994/4‑148 (MQ=255)
        aCTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCaa                                                                                                                                   >  5:39649/1‑147 (MQ=255)
        aCTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCaa                                                                                                                                   <  6:39649/147‑1 (MQ=255)
        aCTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGt                                                                                                                                 <  6:130631/149‑1 (MQ=255)
         cTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTg                                                                                                                                >  4:27762/1‑149 (MQ=255)
          ttGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGGGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCTAGTGc                                                                                                                               <  5:191078/149‑1 (MQ=255)
          ttGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGc                                                                                                                               >  1:313337/1‑149 (MQ=255)
          ttGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGc                                                                                                                               >  5:130911/1‑149 (MQ=255)
                  aCTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAAccttc                                                                                                                       <  4:116287/149‑1 (MQ=255)
                  aCTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAAccttc                                                                                                                       <  5:229564/149‑1 (MQ=255)
                   cTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGAGCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCGGCCCAAGTGCGAAccttc                                                                                                                       <  4:121457/148‑1 (MQ=255)
                    ttGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAAgcttcct                                                                                                                     >  8:247891/1‑149 (MQ=255)
                    ttGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAAccttcct                                                                                                                     >  7:198409/1‑149 (MQ=255)
                      gcctccCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATTCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAAccttcctt                                                                                                                    <  6:315488/148‑1 (MQ=255)
                       ccgccCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTg                                                                                                                   <  5:275317/148‑1 (MQ=255)
                         gccCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGaa                                                                                                                 >  7:237621/1‑148 (MQ=255)
                             gTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCACAAGTGCGAACCTTCCTTGAACAGaa                                                                                                            <  1:109174/149‑1 (MQ=255)
                                  cGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGc                                                                                                       <  1:171180/149‑1 (MQ=255)
                                    aTGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTg                                                                                                                   <  5:135904/135‑1 (MQ=255)
                                    aTGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTg                                                                                                                   >  6:135904/1‑135 (MQ=255)
                                    aTGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAg                                                                                                     <  7:73802/149‑1 (MQ=255)
                                    aTGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAg                                                                                                     <  7:161241/149‑1 (MQ=255)
                                    aTGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAg                                                                                                     <  6:307644/149‑1 (MQ=255)
                                    aTGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAg                                                                                                     <  8:237621/149‑1 (MQ=255)
                                       aaGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGgtg                                                                                                  >  6:159347/1‑149 (MQ=255)
                                        aGACCTGCTTGCAGGCTTTTATGCATGGCGCAACTGCTGAGAAAAACTCAAGAGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGgtg                                                                                                  <  8:198409/148‑1 (MQ=255)
                                          aCCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGTGAAAAACTCAAGCGCGACCCGGTGTGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACg                                                                                              >  2:273748/1‑149 (MQ=255)
                                          aCCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTAc                                                                                               >  3:302369/1‑149 (MQ=255)
                                            ctgctgGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGaa                                                                                                                            >  4:54404/1‑118 (MQ=255)
                                            ctgctgGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGaa                                                                                                                            <  3:54404/118‑1 (MQ=255)
                                                           tATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGGGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCag                                                                               <  5:30994/148‑1 (MQ=255)
                                                            aTGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGATCCTGCAGGTGTACGGCCTGCGCTCTGCaga                                                                              <  1:30507/148‑1 (MQ=255)
                                                            aTGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCaga                                                                              <  2:313337/148‑1 (MQ=255)
                                                                aTGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGaa                                                                           >  6:11714/1‑147 (MQ=255)
                                                                aTGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGaa                                                                           <  5:11714/147‑1 (MQ=255)
                                                                   gcgcAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATg                                                                      <  4:35462/149‑1 (MQ=255)
                                                                       aaCGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCaa                                                                  >  2:112077/1‑149 (MQ=255)
                                                                       aaCGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCaa                                                                  >  4:210456/1‑149 (MQ=255)
                                                                                 ataaaCTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGAt                                                         >  6:357026/3‑148 (MQ=255)
                                                                                 aaaaaCTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGAt                                                         >  2:130616/1‑148 (MQ=255)
                                                                                       tCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAAc                                                                 >  7:275800/1‑134 (MQ=255)
                                                                                       tCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAAc                                                                 <  8:275800/134‑1 (MQ=255)
                                                                                         aaGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGct                                                 <  4:302369/148‑1 (MQ=255)
                                                                                           gcgcGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGctac                                               >  4:91279/1‑148 (MQ=255)
                                                                                            cgcgACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGctacta                                             >  5:47878/1‑149 (MQ=255)
                                                                                            cgcgACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGctacta                                             <  3:210456/149‑1 (MQ=255)
                                                                                                 cccGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGc                                        >  2:308733/1‑149 (MQ=255)
                                                                                                      tgtgGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCgccgcccacaccgggtcgcgcttgagtttttcgcagccgttgcgccatgcataaaagcctgccagcaggtcttcatcgctgacgggcggcaagt                                              <  2:242508‑M2/138‑95 (MQ=255)
                                                                                                      tgtgGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCgccgcccacaccgggtcgcgcttgagtttttcgcagccgttgcgccatgcataaaagcctgccagcaggtcttcatcgctgacgggcggcaagt                                              >  1:242508‑M2/1‑44 (MQ=255)
                                                                                                          ggcggcCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCgccgcccacaccgggtcgcgctggagtttttcgcagccgttgcgccatgcataaaagcctgccagcaggtcttcatcgctgacgggcggcaagtctttccaagtggccg                               <  8:186055‑M2/149‑110 (MQ=255)
                                                                                                          ggcggcCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTAc                                <  1:130616/148‑1 (MQ=255)
                                                                                                           gcggcCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCCAACCTTCATTCAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATAACCGCCTAGAACGAGCCAGTCTccc                               >  3:36076/1‑148 (MQ=255)
                                                                                                              gcCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTAc                                <  7:80523/144‑1 (MQ=255)
                                                                                                              gcCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTAc                                >  8:80523/1‑144 (MQ=255)
                                                                                                                cACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAgg                           >  3:96760/1‑147 (MQ=255)
                                                                                                                   cTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGcc                      >  5:65368/1‑149 (MQ=255)
                                                                                                                      cGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCt                     <  8:15397/147‑1 (MQ=255)
                                                                                                                      cGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCt                     <  3:91279/147‑1 (MQ=255)
                                                                                                                        aaGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCTGAGc                 >  7:142940/1‑149 (MQ=255)
                                                                                                                            ggccggcAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTACAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCTGAGCCAAt             <  7:247891/149‑1 (MQ=255)
                                                                                                                             gccggcAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCTGAGCCAATc            <  3:27762/149‑1 (MQ=255)
                                                                                                                                ggcAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCTGAGCCAATCGGc         <  6:65368/149‑1 (MQ=255)
                                                                                                                                   aGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCACCGGCCTGATTACCGTCTACTACGAGCCTGTCTACCCAGGCAGCCTGAGCCAATCGGcaac      <  6:130911/149‑1 (MQ=255)
                                                                                                                                        cacaGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCTGAGCCAATCGGcaaccaac  >  2:202992/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                          
CCCCGGCCACTTGGAAAGACTTGCCGCCCGTCAGCGATGAAGACCTGCTGGCAGGCTTTTATGCATGGCGCAACGGCTGCGAAAAACTCAAGCGCGACCCGGTGTGGGCGGCCACCTGCGAAGCGGCCGGCAGCGCCACAGCCAGCGCCGCCCAAGTGCGAACCTTCCTTGAACAGAACCTGCAGGTGTACGGCCTGCGCTCTGCAGAGAACAATGCCAACGGCCTGATTACCGGCTACTACGAGCCTGTCTACCCAGGCAGCCTGAGCCAATCGGCAACCAAC  >  NC_002947/5663366‑5663649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.