New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5989267 =2914 (51.540)23 (0.460) 18/230 NT 0.92% noncoding (16/87 nt) PP_mr64 C4 ncRNA
?NC_002947 5989342 = 2376 (47.140)coding (53/399 nt) PP_5247 hypothetical protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 3098 total aligned reads displayed.

CTAGGCTGACCAGGTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCACCGTGAAC  >  NC_002947/5989194‑5989490
                                                                                                                                                       |                                                                                                                                                    
 tAGGCTGACCAGGTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGTGGATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTgccg                                                                                                                                                      >  1:274851/1‑149 (MQ=255)
    gCTGACCAGGTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCtt                                                                                                                                                  <  4:264383/149‑1 (MQ=255)
    gCTGACCAGGTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCtt                                                                                                                                                  >  6:159965/1‑149 (MQ=255)
          cAGGTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGt                                                                                                                                            >  5:232282/1‑149 (MQ=255)
          cAGGTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGt                                                                                                                                            >  2:287787/1‑149 (MQ=255)
           aGGTCGCTGTCGGTTCAGCGATCGGGTGAGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAGCTGCCGCCTTCTGCGTg                                                                                                                                           >  1:204381/1‑149 (MQ=255)
            ggTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTg                                                                                                                                           >  7:310789/1‑148 (MQ=255)
            ggTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAACGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCGTGCCTTCCTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTg                                                                                                                                           <  1:249838/149‑1 (MQ=255)
             gTCGCTGTCTGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGa                                                                                                                                         <  4:32612/149‑1 (MQ=255)
             gTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTgg                                                                                                                                          >  3:10611/1‑148 (MQ=255)
               cGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGaaa                                                                                                                                       <  6:194914/149‑1 (MQ=255)
                gCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAAc                                                                                                                                      <  4:75154/149‑1 (MQ=255)
                 cTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACg                                                                                                                                     <  4:132160/149‑1 (MQ=255)
                    tCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGggt                                                                                                                                  <  6:306644/149‑1 (MQ=255)
                    tCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGggt                                                                                                                                  >  8:310392/1‑149 (MQ=255)
                       gTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGggtggt                                                                                                                               >  2:113998/1‑149 (MQ=255)
                          cAGCGATCGGGTGTTGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCATTTGGGCGCGGGAGGCCGTTTGGCCTACCGGCTTGCCGT‑CTCACCGGTCTTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGtt                                                                                                                              <  1:84124/148‑1 (MQ=255)
                          cAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTg                                                                                                                             <  5:309827/148‑1 (MQ=255)
                           aGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCa                                                                                                                           <  1:174839/149‑1 (MQ=255)
                           aGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCa                                                                                                                           <  5:159965/149‑1 (MQ=255)
                            gCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAg                                                                                                                          <  5:111636/149‑1 (MQ=255)
                             cGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGt                                                                                                                         >  2:148982/1‑149 (MQ=255)
                                  gggTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAAt                                                                                                                    >  5:128021/1‑149 (MQ=255)
                                   ggTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCa                                                                                                                           >  5:210502/1‑141 (MQ=255)
                                       tgGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTGACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTgg                                                                                                               <  7:176143/149‑1 (MQ=255)
                                       tgGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTgg                                                                                                               <  5:366420/149‑1 (MQ=255)
                                       tgGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTg                                                                                                                <  7:261218/148‑1 (MQ=255)
                                        ggAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTg                                                                                                                             >  5:348090/1‑134 (MQ=255)
                                        ggAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTg                                                                                                                >  4:231373/1‑147 (MQ=255)
                                         gAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGTCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGga                                                                                                              <  5:330759/148‑1 (MQ=255)
                                         gAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGtt                                                                                                                              <  6:349248/132‑1 (MQ=255)
                                         gAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGt                                                                                                                         >  8:5083/1‑137 (MQ=255)
                                         gAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGga                                                                                                              <  1:121453/148‑1 (MQ=255)
                                         gAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGga                                                                                                              <  3:270109/148‑1 (MQ=255)
                                         gAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGga                                                                                                              <  1:229251/148‑1 (MQ=255)
                                            aCCCGGATGT‑TATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAg                                                                                                          <  7:126336/149‑1 (MQ=255)
                                            aCCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAg                                                                                                          <  2:225462/149‑1 (MQ=255)
                                              ccGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACgg                                                                                                                                    >  8:222771/1‑121 (MQ=255)
                                              ccGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAgg                                                                                                         >  8:28445/1‑148 (MQ=255)
                                              ccGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAgg                                                                                                         >  7:151355/1‑148 (MQ=255)
                                               cGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGaa                                                                                                       <  5:291711/149‑1 (MQ=255)
                                                ggATGT‑GATGAAGGTCTTGCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAAt                                                                                                      <  4:211977/149‑1 (MQ=255)
                                                ggATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAAt                                                                                                      >  3:248809/1‑149 (MQ=255)
                                                  aTGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTg                                                                                                    <  6:288142/149‑1 (MQ=255)
                                                  aTGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTg                                                                                                    <  2:5205/149‑1 (MQ=255)
                                                  aTGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGACGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTACTGCGTGGAAACGGGTGGTTGCAGTTCAAGCCTGGAGAAGGAATTg                                                                                                    >  4:4803/1‑149 (MQ=255)
                                                   tgt‑gATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGTCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGc                                                                                                   >  4:161786/1‑149 (MQ=255)
                                                   tgt‑gATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGc                                                                                                   <  3:323727/149‑1 (MQ=255)
                                                   tgt‑gATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGc                                                                                                   <  6:61295/149‑1 (MQ=255)
                                                    gt‑gATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGc                                                                                                   >  8:331497/1‑148 (MQ=255)
                                                        atgaAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCAt                                                                                                <  6:258513/148‑1 (MQ=255)
                                                         tgaAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATg                                                                                               >  3:62036/1‑148 (MQ=255)
                                                          gaAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGa                                                                                              >  2:181363/1‑148 (MQ=255)
                                                          gaAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGa                                                                                              >  6:212980/1‑148 (MQ=255)
                                                            aGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGaa                                                                                                           >  6:127608/1‑133 (MQ=255)
                                                            aGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGaaaa                                                                                           <  6:332018/149‑1 (MQ=255)
                                                            aGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGaaaa                                                                                           <  5:252766/149‑1 (MQ=255)
                                                             gggCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCAt                                                                                                >  8:118234/1‑143 (MQ=255)
                                                               gCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTg                                                                                                                >  2:248794/1‑125 (MQ=255)
                                                               gCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGaa                                                                                        >  3:128298/1‑149 (MQ=255)
                                                                 tGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATc                                                                                      >  5:268809/1‑149 (MQ=255)
                                                                  gCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGtt                                                                                                                        <  7:71298/114‑1 (MQ=255)
                                                                   ccGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATc                                                                                      <  8:71424/147‑1 (MQ=255)
                                                                   ccGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATc                                                                                      <  2:332108/147‑1 (MQ=255)
                                                                   ccGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGt                                                                                    <  1:63000/149‑1 (MQ=255)
                                                                         tGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGa                                                                              >  3:178707/1‑149 (MQ=255)
                                                                          GGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGc                                                                                                                            >  7:100840‑M1/1‑102 (MQ=255)
                                                                               TTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTccc                                                                                 >  2:307739‑M1/1‑140 (MQ=255)
                                                                                  TGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTccc                                                                                 >  8:259002‑M1/1‑137 (MQ=255)
                                                                                    CGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAAtt                                                                                                     >  3:204504‑M1/1‑115 (MQ=255)
                                                                                    CGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTcc                                                                   >  5:95860‑M1/1‑149 (MQ=255)
                                                                                      CGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTcccc                                                                 >  3:294708‑M1/1‑149 (MQ=255)
                                                                                       GTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAAtcgtcccgggg                                                                             <  1:303858‑M1/136‑5 (MQ=255)
                                                                                          aGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAaca                                                             >  5:185945/1‑149 (MQ=255)
                                                                                          aGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGACGCCTTCTGAGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCCACCCTCCCCAaca                                                             >  7:94155/1‑149 (MQ=255)
                                                                                            gCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAAcacc                                                           <  4:297837/149‑1 (MQ=255)
                                                                                                      cTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAAtt                                                                                                     >  7:289353/1‑97 (MQ=255)
                                                                                                      cTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCGCCCCTCCCCAACACCACACAACGct                                                 >  1:143571/1‑149 (MQ=255)
                                                                                                      cTACCGGCTTGACTT‑CTCACCGGT‑TTTCAACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATACTGGAGAAGTAATTGCCATGAAAACAATCGACACAGAACCAACCCTCCCAAAAACCACACAACGct                                                 >  8:148368/1‑149 (MQ=255)
                                                                                                       tACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGctc                                                >  8:181280/1‑149 (MQ=255)
                                                                                                           ggCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGACATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTc                                            <  7:335501/149‑1 (MQ=255)
                                                                                                            gCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCa                                           <  1:328036/149‑1 (MQ=255)
                                                                                                              ttGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTc                                                                                   >  6:371159/1‑107 (MQ=255)
                                                                                                                  cTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTc                                                                    >  1:34731/1‑118 (MQ=255)
                                                                                                                   tt‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTAGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCAACCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTg                                    >  5:5782/1‑149 (MQ=255)
                                                                                                                    t‑ctcACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTCCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGc                                   >  3:81658/1‑149 (MQ=255)
                                                                                                                       tcACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGa                                 >  1:39013/1‑149 (MQ=255)
                                                                                                                         aCCGGT‑TTTCCACCCCGCGCACGACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTATTTCAGCCCCTGCGATg                               >  7:53494/1‑149 (MQ=255)
                                                                                                                         aCCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCAGCGTGGAAACGGGTGGTTGCAGTTAAATCCTGGAGAAGGAATAGCCATGAAAAGAATCGt                                                                                    >  1:100792/1‑96 (MQ=255)
                                                                                                                           cGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGcc                             >  3:159508/1‑149 (MQ=255)
                                                                                                                             gT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTTGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCCCTTTCAGCCGCTGCGATGCCgg                           <  7:225895/149‑1 (MQ=255)
                                                                                                                             gT‑TTTCCACCCCGCGCACAACTGCCGACTTCTGCGTTGAAACGGGTGGTCGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCTCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCgg                           <  4:186334/149‑1 (MQ=255)
                                                                                                                              t‑tttCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACTCTCTTTAAGACGCTGCGATGCCgg                           >  3:226156/1‑148 (MQ=255)
                                                                                                                                   CCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACCCCCCACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATc                      <  3:353833‑M1/149‑1 (MQ=255)
                                                                                                                                     ACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATccc                    >  2:83430‑M1/1‑149 (MQ=255)
                                                                                                                                        ccGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCa                 <  6:238665/149‑1 (MQ=255)
                                                                                                                                             cacaactgccGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCattatt            <  2:353359‑M2/139‑1 (MQ=255)
                                                                                                                                               caactgccGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCa          <  4:10785‑M2/141‑1 (MQ=255)
                                                                                                                                                aactgccGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCAc         <  2:207929‑M2/142‑1 (MQ=255)
                                                                                                                                                 actgccGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCAcc        <  7:200706‑M2/143‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                    
CTAGGCTGACCAGGTCGCTGTCGGTTCAGCGATCGGGTGTGGAAACCCGGATGT‑GATGAAGGGCTGCCGTTATGGCAGTTGTGCGCGTGAGGCCGTTTGGCCTACCGGCTTGCCTT‑CTCACCGGT‑TTTCCACCCCGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCACCGTGAAC  >  NC_002947/5989194‑5989490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.