| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2103125 = | 22 (0.710) | 11 (0.360) +TT |
6/286 | 3.0 | 27.4% | intergenic (+85/‑1) | PP_t23/PP_t24 | tRNA‑Gly/tRNA‑Gly |
| ? | NC_002947 | = 2242257 | 37 (1.190) | noncoding (76/76 nt) | PP_t30 | tRNA‑Glu | |||||
GGTTCGATCCCGCTTAGCTCCACCATTTCTGCCAGGGTTCACGCAAGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATATGATGAGAATAATATTTCGATCAT > NC_002947/2242115‑2242403 | ggTTCGATCCCGCTTAGCTCCACCATTTCTGCCAGGGTTCACGCAAGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGttt > 6:148324/1‑148 (MQ=255) tCGATCCCGCTTAGCTCCACCATTTCTGCCAGGGTTCACGCAAGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTAcc > 5:146605/1‑148 (MQ=255) cTCCACCATTTCTGCCAGGGTTCACGCAAGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGa > 3:88582/1‑148 (MQ=255) cTCCACCATTTCTGCCAGGGTTCACGCAAGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGa > 4:14408/1‑148 (MQ=255) cTCCACCATTTCTGCCAGGGTTCACGCAAGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGa > 2:105280/1‑148 (MQ=255) ccAGGGTTCACGCAAGTGGATCTTCGCGAAGGTTACGTCCACTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTGCGAGTCCGCGAGGGGACGCCCCGTTTACCCGCGGTTTGCGGGACTTTACAGGCTCAt > 8:140987/1‑148 (MQ=21) gCAAGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTAACCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGa > 5:107290/1‑148 (MQ=255) aaGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAAt < 6:39950/148‑1 (MQ=255) tCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCtt > 6:52051/1‑148 (MQ=255) cgAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGttt > 8:49341/1‑148 (MQ=255) gAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGtttt < 1:27206/148‑1 (MQ=255) tCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTtct > 5:54273/1‑147 (MQ=255) ccccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccg < 6:78855‑M2/148‑75 (MQ=255) cccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgc < 1:91450‑M2/148‑76 (MQ=255) ccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagtgcgagtctcgtttcccgct < 3:119025‑M2/148‑77 (MQ=255) ccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCaa > 6:20381/1‑147 (MQ=255) cTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagtccgagtctcgtttcccgct < 3:47046‑M2/147‑77 (MQ=255) cTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCggg < 4:120694/92‑1 (MQ=255) cTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCggg > 3:120694/1‑92 (MQ=255) cTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCaata > 8:84538/1‑148 (MQ=255) cTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCaata > 1:112942/1‑148 (MQ=255) ttCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGCGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATCCGCTTATTGAATGGGCCTTTTGATTTTTCCCTTCTCaataa > 3:4167/1‑148 (MQ=255) cTAGTGGCCTAGGACACCGCCCTTTCACCTCGGTAACAGGGTTTCGATTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTc < 8:9927/148‑1 (MQ=255) aGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTccc < 3:14408/148‑1 (MQ=255) cTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGAc > 6:39078/1‑147 (MQ=255) tAGGACACAGCCCTTTAACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGACACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACaa > 6:26702/1‑148 (MQ=255) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAAc > 3:109818/1‑148 (MQ=255) acCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaatcaagatttacagcct < 4:122754‑M2/147‑98 (MQ=255) acCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaataaagatttccagcct < 3:139614‑M2/147‑98 (MQ=255) cGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaataaaaatttaaagcctaaa < 2:53526‑M2/148‑101 (MQ=255) cGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGca > 5:163155/1‑145 (MQ=255) cTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGAt > 7:29850/1‑148 (MQ=255) tttCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaataaagatttacagccttcatcgga < 2:139936‑M2/148‑106 (MQ=255) ggcggTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTttgctt < 1:105280/148‑1 (MQ=255) ggcggTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTttgctt < 4:88582/148‑1 (MQ=255) cggTTAGAGGGTCTCGAGTCCCCTATGTGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaatcaagatttacagccttccacggaggtctgta > 4:139614‑M2/1‑35 (MQ=255) gTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGcc > 2:71706/1‑147 (MQ=255) ggTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAatat < 3:138905/148‑1 (MQ=255) ttCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATatga > 1:131458/1‑148 (MQ=255) aGTCCCCTAGGGGCCGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCGGTTTGTTTTTTCCCGGCGCAATAATTTTCCCCCGACAAACGGCCGCTGAGTTTGCTTGCCAAAACAGAtgatga > 8:43183/1‑147 (MQ=255) tCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATATGATgaga > 6:46442/1‑147 (MQ=255) cccTAGGGGTCGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATATGATGAGaata > 1:41837/1‑148 (MQ=255) ccTAGGGGACGCCAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaataaatatataaagccttaaacggatggctttagatccaagaaaataaacgc < 4:100624‑M2/146‑133 (MQ=255) aGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATATGATGAGAATAatat > 5:136780/1‑148 (MQ=255) gggACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATATGATGAGAATAATAtt < 3:145335/147‑1 (MQ=255) gCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATATGATGAGAATAATATTTCGatc > 2:29392/1‑148 (MQ=255) ccACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATATGATGAGAATAATATTTCGatca < 8:54444/148‑1 (MQ=255) cAaatgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaatcaagatttacagccttccacggaggtctgtagatcctcgaaaatagacgcttcggcgtcttttt > 3:122754‑M2/1‑2 (MQ=255) | GGTTCGATCCCGCTTAGCTCCACCATTTCTGCCAGGGTTCACGCAAGTGGATCTTCGCGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCAGATTTTGCTTGCCAAAAAATATGATGAGAATAATATTTCGATCAT > NC_002947/2242115‑2242403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |