New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5985206 =5181 (78.370)110 (1.740) 37/268 0.9 2.2% coding (390/405 nt) PP_5244 AraC family transcriptional regulator
?NC_002947 5985245 = 4861 (76.840)coding (351/405 nt) PP_5244 AraC family transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 5717 total aligned reads displayed.

GGTGGTCGACCAGCAGCACCACGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCA  >  NC_002947/5985056‑5985354
                                                                                                                                                       |                                                                                                                                                    
  tggtCGACCAGCAGCACCACGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTgc                                                                                                                                                      >  2:246721/1‑149 (MQ=255)
   agtcaacaccggcctttcgccgcaggcctggcgcctgctggcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagcc                                                                                                                                                      <  2:363544‑M1/1‑1 (MQ=255)
     tcaacaccggcctttcgccgcaggcctggcgcctgctggcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagccgc                                                                                                                                                    <  1:221497‑M1/3‑1 (MQ=255)
     tcaacaccggcctttcgccgcaggcctggcgcctgctggcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagccgc                                                                                                                                                    <  7:351758‑M1/3‑1 (MQ=255)
     tcaacaccggcctttcgccgcaggcctggcgcctgctggcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagccgc                                                                                                                                                    >  4:197320‑M1/147‑149 (MQ=255)
       gACCAGCAGCACCACGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGGTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCt                                                                                                                                                  <  5:237226/148‑1 (MQ=255)
        acaccggcctttcgccgcaggcctggcgcctgctggcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagcCGCCTg                                                                                                                                                 >  1:193866‑M1/144‑149 (MQ=255)
         ccAGCAGCACCACGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTgcc                                                                                                                                               <  1:100165/149‑1 (MQ=255)
            cggcctttcgccgcaggcctggcgcctgctggcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagcCGCCTgccgc                                                                                                                                             <  8:150547‑M1/10‑1 (MQ=255)
             cagcaCCACGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCa                                                                                                                                           <  5:187106/149‑1 (MQ=255)
                   cacGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTCAATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTgccgc                                                                                                                                             >  1:80496/1‑142 (MQ=255)
                   cacGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCtt                                                                                                                                     >  6:17634/1‑149 (MQ=255)
                    acGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTg                                                                                                                                    <  7:290733/149‑1 (MQ=255)
                      ggCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTggg                                                                                                                                  >  2:83892/1‑149 (MQ=255)
                      ggCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTggg                                                                                                                                  >  5:287961/1‑149 (MQ=255)
                      ggCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTggg                                                                                                                                  <  8:356588/149‑1 (MQ=255)
                       gCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTTGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGt                                                                                                                                 <  4:284875/149‑1 (MQ=255)
                        cgtcgtCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGtg                                                                                                                                <  5:342451/149‑1 (MQ=255)
                         gtcgtcTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGtgg                                                                                                                               >  7:128184/1‑149 (MQ=255)
                                 tGTTCAGGCGCTTGTATTCTGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCGGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGtggctggc                                                                                                                          <  4:142880/146‑1 (MQ=255)
                                 tGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCg                                                                                                                        <  6:288306/148‑1 (MQ=255)
                                   gcctgctggcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagccgc                                                                                                                                                    <  3:221656‑M1/3‑1 (MQ=255)
                                      aGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAgg                                                                                                                  >  6:151909/1‑149 (MQ=255)
                                        gcgcTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAggcg                                                                                                                >  8:126125/1‑149 (MQ=255)
                                        ctggcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagcCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAgg                                                                                                                  >  2:60452‑M1/112‑148 (MQ=255)
                                           gcgcgcatggaaaaggccaagcgcttgcttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagcCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAggcgg                                                                                                               >  6:23437‑M1/109‑148 (MQ=255)
                                               tAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTgg                                                                                                                                   <  2:166506/123‑1 (MQ=255)
                                               tAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGa                                                                                                           >  7:19999/1‑147 (MQ=255)
                                                aaTCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAg                                                                                                        >  6:32229/1‑149 (MQ=255)
                                                 aTCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAg                                                                                                        >  7:228978/1‑148 (MQ=255)
                                                     agatctcTC‑ATGGTGTTACTTCTTTTGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAATTGTCTGCGCCTGCCGCCAGGCCTTGGGTGTCTGGCCGACCAGGCGGCTGAAAGCACgg                                                                                                   <  4:348713/143‑1 (MQ=255)
                                                      gTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGCCCAGGCGGCTGAAAGGACggg                                                                                                  >  4:228976/1‑149 (MQ=255)
                                                         ggCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTg                                                                                                <  5:156189/148‑1 (MQ=255)
                                                            tC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAAt                                                                                            >  5:105409/1‑149 (MQ=255)
                                                               aTGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATgg                                                                                          >  3:192100/1‑149 (MQ=255)
                                                               aTGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATgg                                                                                          <  4:320748/149‑1 (MQ=255)
                                                               aTGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATgg                                                                                          <  4:170535/149‑1 (MQ=255)
                                                                 ggggTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGtggctggc                                                                                                                          >  3:281211/1‑115 (MQ=255)
                                                                  gggTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGc                                                                                        <  7:425/148‑1 (MQ=255)
                                                                  gggTCACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGcc                                                                                       >  2:391803/1‑149 (MQ=255)
                                                                     tGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAAt                                                                                            >  6:123571/1‑141 (MQ=255)
                                                                     tGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTgg                                                                                    >  1:384537/1‑149 (MQ=255)
                                                                      taCTCCTTGGGTTGGGATAACGGGCGGGGTCTGTCCGGTGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGTCGTCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGGGTAATGTGCCTGGt                                                                                   <  2:331906/148‑1 (MQ=255)
                                                                       ttgcaaccgaggcgcctatcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagcCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCAc                                                                                                     <  6:259840‑M1/50‑1 (MQ=255)
                                                                       aCTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGt                                                                                   >  8:324337/1‑148 (MQ=255)
                                                                          ccTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATg                                                                                           >  8:292591/1‑137 (MQ=255)
                                                                           cTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTcac                                                                                <  6:376666/147‑1 (MQ=255)
                                                                                gttgggATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGcc                                                                                       <  7:153112/135‑1 (MQ=255)
                                                                                     gATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGc                                                                                        <  3:110103/129‑1 (MQ=255)
                                                                                     gATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCAtt                                                                    >  5:99660/1‑149 (MQ=255)
                                                                                      aTAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTc                                                                   <  5:44909/149‑1 (MQ=255)
                                                                                        atcacccacgtgagcctggaatgcggcttttgtgaccaggcccatttcacccgtgctttcagcCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAgg                                                                                                                  <  6:70857‑M1/37‑1 (MQ=255)
                                                                                         aCGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAg                                                                <  3:4497/149‑1 (MQ=255)
                                                                                          cGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGc                                                                                        <  4:378261/124‑1 (MQ=255)
                                                                                          cGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAgg                                                               <  1:350259/149‑1 (MQ=255)
                                                                                             gCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGt                                                                                                 >  6:345544/1‑112 (MQ=255)
                                                                                             gCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTc                                                            <  5:69432/149‑1 (MQ=255)
                                                                                               cGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTg                                                                                                            <  1:170323/99‑1 (MQ=255)
                                                                                                 gCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATg                                                                                           >  7:70230/1‑114 (MQ=255)
                                                                                                 gCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGt                                                        <  3:95052/149‑1 (MQ=255)
                                                                                                    cTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTggg                                                     <  8:75432/149‑1 (MQ=255)
                                                                                                     tGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGACTGGTAACAAAAGCCGCATTCCAGGCTAACGTGGGt                                                    >  8:258121/1‑149 (MQ=255)
                                                                                                       tCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCa                                                                                                      <  1:13829/97‑1 (MQ=255)
                                                                                                           cAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGt                                                    >  7:9118/1‑143 (MQ=255)
                                                                                                                gTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCACCt                                         >  7:320788/1‑149 (MQ=255)
                                                                                                                   ataCCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTcac                                                                                >  6:46077/1‑107 (MQ=255)
                                                                                                                     aCCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGtt                                    >  3:250855/1‑149 (MQ=255)
                                                                                                                      ccGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGtt                                    <  5:209142/148‑1 (MQ=255)
                                                                                                                      ccGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGGGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGtt                                    <  1:315290/148‑1 (MQ=255)
                                                                                                                       ccgTGGAAAGGATTGGCTTAAGAAAGTGTCTGCCCCTGCCCACAGGCCTTCGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGAGAAATGGGGCGGGTAACAAAAGCCGCATTCCCGGCTCACGTGGGTGATAGGCTCCTCGGTTg                                   >  2:267473/3‑148 (MQ=255)
                                                                                                                       cGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgc                                  <  7:176205/149‑1 (MQ=255)
                                                                                                                       cGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTg                                   >  1:28339/1‑148 (MQ=255)
                                                                                                                         gTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgc                                  >  4:118290/1‑147 (MQ=255)
                                                                                                                           ggATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCTGGCCTTGGGTGGCTAGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaagc                              <  2:194415/149‑1 (MQ=255)
                                                                                                                           ggATAGCATTGGCTTAAGAAAGTGGGTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaagc                              <  3:66821/149‑1 (MQ=255)
                                                                                                                            gATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGgcg                                            >  5:262210/1‑134 (MQ=255)
                                                                                                                            gATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaagc                              <  7:256716/148‑1 (MQ=255)
                                                                                                                             aTAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaagcaa                            <  6:204266/149‑1 (MQ=255)
                                                                                                                                 cATTGGCTTAAGAAAGTGTCTGCGCCTGCCTCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAgcgc                        <  8:197583/149‑1 (MQ=255)
                                                                                                                                 cATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaagcaa                            <  4:253963/145‑1 (MQ=255)
                                                                                                                                  aTTGGTTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCt                       >  2:221497/1‑149 (MQ=255)
                                                                                                                                  aTTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCt                       >  3:165875/1‑149 (MQ=255)
                                                                                                                                  aTTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACAAGGCGGATGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCt                       >  3:37118/1‑149 (MQ=255)
                                                                                                                                      gCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGaaa                                                                                                         <  5:133625/63‑1 (MQ=255)
                                                                                                                                       cTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGcc                  >  3:340044/1‑149 (MQ=255)
                                                                                                                                        ttAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCt                 >  2:10162/1‑149 (MQ=255)
                                                                                                                                        ttAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCt                 >  5:317251/1‑149 (MQ=255)
                                                                                                                                        ttAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCt                 >  4:76013/1‑149 (MQ=255)
                                                                                                                                        ttAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCCGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCt                 >  3:309608/1‑149 (MQ=255)
                                                                                                                                           aGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCtttt              <  2:300639/149‑1 (MQ=255)
                                                                                                                                           aGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCtttt              <  6:99660/149‑1 (MQ=255)
                                                                                                                                            gAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTg                     <  1:57980/141‑1 (MQ=255)
                                                                                                                                                gtgtCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCg                                                                        <  8:174708/86‑1 (MQ=255)
                                                                                                                                                gtgtCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATg         >  2:132657/1‑149 (MQ=255)
                                                                                                                                                 tgtCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATgc        >  5:37590/1‑149 (MQ=255)
                                                                                                                                                   tCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGt                                                    >  1:251656/1‑103 (MQ=255)
                                                                                                                                                     tGCGCCTGGCGCCAGGCCTTTGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGGAAGCAAGCGCTTGGCCTTTTCCATGCGCGC    <  4:52599‑M1/149‑1 (MQ=255)
                                                                                                                                                     tGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGC    >  3:137784‑M1/1‑149 (MQ=255)
                                                                                                                                                     tGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGC    >  8:230615‑M1/1‑149 (MQ=255)
                                                                                                                                                       CGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCca  >  8:50765‑M1/1‑149 (MQ=255)
                                                                                                                                                       |                                                                                                                                                    
GGTGGTCGACCAGCAGCACCACGGCGTCGTCTTTGTTCAGGCGCTTGTAATCGGGTTGGCTC‑ATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCA  >  NC_002947/5985056‑5985354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.