New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5985206 =5181 (78.370)110 (1.740) 37/268 0.9 2.2% coding (390/405 nt) PP_5244 AraC family transcriptional regulator
?NC_002947 5985245 = 4861 (76.840)coding (351/405 nt) PP_5244 AraC family transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 5940 total aligned reads displayed.

CGCTTGTAATCGGGTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGGTGTTGACTTTGA  >  NC_002947/5985097‑5985396
                                                                                                                                                    |                                                                                                                                                        
      tAATCGGGTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGaaa                                                                                                                                                    <  7:182541/149‑1 (MQ=255)
       aaTCGGGTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGaaa                                                                                                                                                    <  7:74015/148‑1 (MQ=255)
        aTCGGGTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGc                                                                                                                                                  >  3:336765/1‑149 (MQ=255)
           gggTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACg                                                                                                                                               <  8:77796/149‑1 (MQ=255)
            ggTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACgg                                                                                                                                              <  5:138813/149‑1 (MQ=255)
            ggTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACgg                                                                                                                                              <  6:237702/149‑1 (MQ=255)
            ggTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACgg                                                                                                                                              >  2:146622/1‑149 (MQ=255)
            ggTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACgg                                                                                                                                              >  6:156189/1‑149 (MQ=255)
                   tCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCCCGGGTGAAAt                                                                                                                                       >  6:181649/1‑149 (MQ=255)
                        gggTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGcc                                                                                                                                  >  6:209142/1‑149 (MQ=255)
                          gTGACTGATTGTGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTg                                                                                                                                <  8:333969/149‑1 (MQ=255)
                             aCTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGt                                                                                                                              <  2:228560/148‑1 (MQ=255)
                              cTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTca                                                                                                                            >  2:315144/1‑149 (MQ=255)
                                ccTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACTGGTGGATAGCATTTGCTTAAGAAAGTGTCTTCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGGCTGGTcac                                                                                                                           >  1:278063/1‑148 (MQ=255)
                                ccTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTg                                                                                                                                                       >  2:373335/1‑120 (MQ=255)
                                 cTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTcaca                                                                                                                          >  1:339552/1‑148 (MQ=255)
                                  ttgggttgggATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGACGCCAGGCCGTGGGTGGCTGGCCGACCAGGCGGCAGAAAGCACGGGTGAAATGGGCCTGGTCACaa                                                                                                                         >  4:80173/1‑148 (MQ=255)
                                      gttgggATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGcc                                                                                                                                  >  8:153112/1‑135 (MQ=255)
                                          ggATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCAt                                                                                                                >  6:127006/1‑149 (MQ=255)
                                          ggATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCAt                                                                                                                >  4:260867/1‑149 (MQ=255)
                                                    ccGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCa                                                                                                      >  6:51518/1‑149 (MQ=255)
                                                      ggCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACg                                                                                                    >  2:11797/1‑149 (MQ=255)
                                                       gCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGt                                                                                                   >  4:112012/1‑149 (MQ=255)
                                                       gCACTGTCCGCAGGGGTTATACCGGTGGATAGAATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGt                                                                                                   >  1:46632/1‑149 (MQ=255)
                                                          ctatCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTgg                                                                                                 <  5:7573/145‑1 (MQ=255)
                                                          cTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTggg                                                                                                <  5:107011/149‑1 (MQ=255)
                                                          cTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTggg                                                                                                <  8:180443/149‑1 (MQ=255)
                                                           tGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGt                                                                                               >  6:38442/1‑149 (MQ=255)
                                                               cGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGa                                                                                             >  2:180487/1‑147 (MQ=255)
                                                                gCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTgg                                                                                                 <  1:193051/142‑1 (MQ=255)
                                                                   ggggTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGgcg                                                                                       <  3:273855/149‑1 (MQ=255)
                                                                    gggTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGgcgc                                                                                      >  1:248940/1‑149 (MQ=255)
                                                                     ggTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGcc                                                                                     >  4:383312/1‑149 (MQ=255)
                                                                       ttATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTc                                                                                   >  3:40028/1‑149 (MQ=255)
                                                                          taCCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAg                                                                                          >  4:358124/1‑139 (MQ=255)
                                                                          taCCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCAGCCAGGCCTTGGGTGGATGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGt                                                                                >  1:74361/1‑149 (MQ=255)
                                                                            gcGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCGGTCCAGGTGGCTGAAATCACGGGTGATATGGGCCTGGTCACAAAAGGCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGtt                                                                               <  6:100342/147‑1 (MQ=255)
                                                                            ccGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAg                                                                                                                      >  7:294914/1‑109 (MQ=255)
                                                                             cGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgc                                                                             <  7:103142/149‑1 (MQ=255)
                                                                             cGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTg                                                                              >  7:267691/1‑148 (MQ=255)
                                                                                tGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGtt                                                                               >  2:98066/1‑144 (MQ=255)
                                                                                tGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaag                                                                          >  5:268539/1‑149 (MQ=255)
                                                                                tGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaag                                                                          >  8:363852/1‑149 (MQ=255)
                                                                                  gATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATa                                                                                           >  3:156871/1‑130 (MQ=255)
                                                                                  gATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaagc                                                                         <  1:163802/148‑1 (MQ=255)
                                                                                   aTAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAACTGGGCCTGGTCACAACAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTgcaagcaa                                                                       <  3:243427/149‑1 (MQ=255)
                                                                                       cATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAgcgc                                                                   >  3:181316/1‑149 (MQ=255)
                                                                                        aTTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCt                                                                  >  7:157268/1‑149 (MQ=255)
                                                                                        aTTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTAGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCgg                                                                                 >  7:235637/1‑134 (MQ=255)
                                                                                         ttGGCTTAAGAAAGTGTCTGCGCCTGCCTCCAGGCCTTGGGTCGCTGTCCGACCAAGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCtt                                                                 >  4:329703/1‑149 (MQ=255)
                                                                                         ttGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGAAGCTGAAAGCACGGGTGAAATGGGCCTGGGCACAAAACGCGCATTAACAGCTAACGTTGGTGCTAGGCGGCTCGGGTGTAAAGCAGCGCtt                                                                 >  1:305048/1‑149 (MQ=255)
                                                                                            gCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGgcgc                                                                                      <  7:98200/125‑1 (MQ=255)
                                                                                            gCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGc                                                              >  3:90878/1‑149 (MQ=255)
                                                                                             cTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGcc                                                             >  7:328574/1‑149 (MQ=255)
                                                                                                aaGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGc                                                                                                         <  8:298761/102‑1 (MQ=255)
                                                                                                aaGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGtt                                                                               >  3:303803/1‑128 (MQ=255)
                                                                                                 aGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCtttt                                                         >  3:128080/1‑149 (MQ=255)
                                                                                                  gAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAgg                                                                                                          >  3:61221/1‑99 (MQ=255)
                                                                                                  gAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTc                                                        >  5:318131/1‑149 (MQ=255)
                                                                                                   aaaGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTc                                                        >  4:231980/1‑148 (MQ=255)
                                                                                                    aaGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGc                                                                                                                     <  6:351278/86‑1 (MQ=255)
                                                                                                     aGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCAt                                                     <  4:169431/149‑1 (MQ=255)
                                                                                                       tgtCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATgc                                                   >  2:344878/1‑149 (MQ=255)
                                                                                                             CGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCca                                            >  7:211915‑M1/1‑149 (MQ=255)
                                                                                                                  GCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAgg                                       <  6:26430‑M1/149‑1 (MQ=255)
                                                                                                                   cggccagccacccaaggcctggccgaccaggcgGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGgc                                      >  6:294046‑M2/34‑149 (MQ=255)
                                                                                                                     gccAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGgcgc                                    >  5:21303/1‑149 (MQ=255)
                                                                                                                     gccAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGgcgc                                    >  5:192662/1‑149 (MQ=255)
                                                                                                                     gccAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTGTTCCATGCGCGCCAGCAGgcgc                                    >  5:349077/1‑149 (MQ=255)
                                                                                                                       cAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGgcgc                                    >  7:46767/1‑147 (MQ=255)
                                                                                                                          gCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGc                               <  2:4328/149‑1 (MQ=255)
                                                                                                                          gCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGc                               >  5:163392/1‑149 (MQ=255)
                                                                                                                            cTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCCgcaggcctggcgcct                              <  8:53371‑M1/149‑16 (MQ=255)
                                                                                                                               gggTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTg                            <  2:74892/147‑1 (MQ=255)
                                                                                                                                ggTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCTTGCGCGCCAGCAGGCGCCAGGCCTGCgg                         >  1:218864‑M2/1‑147 (MQ=255)
                                                                                                                                ggTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCgg                         <  8:208051‑M2/149‑3 (MQ=255)
                                                                                                                                ggTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCgg                         >  3:363831‑M2/1‑147 (MQ=255)
                                                                                                                                ggTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCg                          >  8:274074‑M2/1‑147 (MQ=255)
                                                                                                                                    gctggcCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGaa                     <  5:288898/149‑1 (MQ=255)
                                                                                                                                     ctggcCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGaaa                    <  8:237428/149‑1 (MQ=255)
                                                                                                                                     ctggcCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGaaa                    <  1:132662/149‑1 (MQ=255)
                                                                                                                                      tggcCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAg                   <  4:54519/149‑1 (MQ=255)
                                                                                                                                        gcCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGc                 <  2:256861/149‑1 (MQ=255)
                                                                                                                                           gACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCa                                  <  8:127940/129‑1 (MQ=255)
                                                                                                                                            aCCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAgg                                       >  4:291493/1‑123 (MQ=255)
                                                                                                                                            aCCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGgt             <  2:283020/149‑1 (MQ=255)
                                                                                                                                            aCCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGgt             >  5:51104/1‑149 (MQ=255)
                                                                                                                                            aCCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGgt             <  5:382669/149‑1 (MQ=255)
                                                                                                                                             ccAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCTCGTGGGGGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGgtg            <  7:357674/149‑1 (MQ=255)
                                                                                                                                              caggcgGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGgtgt           >  1:370220‑M2/7‑149 (MQ=255)
                                                                                                                                              caggcgGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGgtgt           <  6:325088‑M2/143‑1 (MQ=255)
                                                                                                                                              caggcgGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGgtgt           >  1:91284‑M2/7‑149 (MQ=255)
                                                                                                                                              cAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCGCAGGCCTGGCGCCTGCtggcgcgcatggaaaag          >  6:79140‑M2/1‑132 (MQ=255)
                                                                                                                                               aGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTT‑‑‑‑‑‑‑‑CGCCgcaggcctggcgcctgctggcgcgcatggaaaaggccaagcgc  <  7:130613‑M1/149‑44 (MQ=255)
                                                                                                                                                ggcggcTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGC                                                 >  3:212080‑M1/1‑110 (MQ=255)
                                                                                                                                                 gcgGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGGTGTTGa        >  2:206079‑M2/4‑149 (MQ=255)
                                                                                                                                                 gcgGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGGTGTTGa        <  1:101530‑M2/146‑1 (MQ=255)
                                                                                                                                                   gGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCTGCtggcgcgc                                  <  4:199730‑M2/120‑3 (MQ=255)
                                                                                                                                                   gGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGGTGTTGACt      <  4:141676‑M2/148‑1 (MQ=255)
                                                                                                                                                    gcTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGGTGTTGACtt     >  5:23858/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                        
CGCTTGTAATCGGGTTGGCTCATGGGGTGACTCCTTGGGTTGGGATAACGGGCCGGCACTGTCCGCAGGGGTTATACCGGTGGATAGCATTGGCTTAAGAAAGTGTCTGCGCCTGCCGCCAGGCCTTGGGTGGCTGGCCGACCAGGCGGCTGAAAGCACGGGTGAAATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGGTGTTGACTTTGA  >  NC_002947/5985097‑5985396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.