| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 63722 = | 56 (1.010) | 5 (0.100) | 5/240 | NT | 10.1% | coding (741/858 nt) | PP_0054 | membrane protein |
| ? | NC_002947 | 63778 = | 37 (0.710) | coding (797/858 nt) | PP_0054 | membrane protein | |||||
CTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGCAAACATCTGCTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCAGCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/63875‑63722‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcagaTGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCC > NC_002947/63778‑63882 CTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGCAAACATCTGCTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCA < 6:234983/149‑1CTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGCAAACATCTGCTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAG > 3:273256/1‑147 CTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGCAAACATCTGCTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCAG < 6:114830/147‑1 TCTGCTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTC < 5:231749/133‑1 TCTGCTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTC > 6:231749/1‑133 GCTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGC > 5:130691/1‑149 CTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAG > 1:250776/1‑147 GCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCC < 6:130691/149‑1 GCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCC < 3:343530/113‑1 GCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCAGCGCACAACGCCAGCAGGTAGTCC > 4:343530/1‑113 CTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGCAAACATCTGCTGCAGACGCGGCCCGGCCAATCTGGCTGCCAAAGGCCGCGCCAGCAGCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/63875‑63722‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcagaTGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCC > NC_002947/63778‑63882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |