| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 515444 = | 49 (0.880) | 3 (0.060) | 3/240 | NT | 5.9% | coding (298/648 nt) | coq | 2‑nonaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol hydroxylase |
| ? | NC_002947 | 515527 = | 50 (0.960) | coding (215/648 nt) | coq | 2‑nonaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol hydroxylase | |||||
CAGGCCCGTCATATTGCCGGGCTGATGCGCATCAACCATACCGGTGAAGTCTGCGCCCAGGCGTTGTACCAAGGCCAGGCCCTGACCGCCAAGCTGCCCGAAGTGCGCAAGGCCATGGAGCATGCCGCCGAGGAAGAAGTGGATCACCTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/515597‑515444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcctTGGTACAACGCCTGGGCGCAGACTTCACCGGTATGGTTGATGCGCATCAGCCCGGCAATATGACGGGCCTGCTGCTCGTCCAGGTCAGCGTCTGGCTGGACGATGGCCGGCGATGGCCGGGTGGGTTGGCCGCTGAAGGGCAGCAAG > NC_002947/515527‑515673 CAGGCCCGTCATATTGCCGGGCTGATGCGCATCAACCATACCGGTGAAGTCTGCGCCCAGGCGTTGTACCAAGGCCAGGCCCTGACCGCCAAGCTGCCCGAAGTGCGCAAGGCCATGGAGCATGCCGCCGAGGAAGAAGTGGATCACCT < 1:146729/149‑1CAGGCCCGTCATATTGCCGGGCTGATGCGCATCAACCATACCGGTGAAGTCTGCGCCCAGGCGTTGTACCAAGGCCAGGCCCTGACCGCCAAGCTGCCCGAAGTGCGCAAGGCCATGGAGCATGCCGCCGAGGAAGAAGTGGATCACCT < 6:215985/149‑1 GGCCCGTCATATTGCCGGGCTGATGCGCATCAACCATACCGGTGAAGTCTGCGCCCAGGCGTTGTACCAAGGCCAGGCCCTGACCGCCAAGCTGCCCGAAGTGCGCAAGGCCATGGAGCATGCCGCCGAGGAAGAAGTGGATCACCTGG > 6:121532/1‑149 CAAGGCCAGGCCCTGACCGCCAAGCTGCCCGAAGTGCGCAAGGCCATGGAGCATGCCGCCGAGGAAGAAGTGGATCACCTGGCCTTGGTACAACGCCTGGGCGCAGACTTCACCGGTATGGTTGATGCGCATCAGCCCGGCAATATGAC > 6:57481/1‑149 AAGGCCAGGCCCTGACCGCCAAGCTGCCCGAAGTGCGCAAGACCATGGAGCATGCCGCCGAGGAAGAAGTGGATCACCTGGCCTTGGTACAACGCCTGGGCGCAGACTTCACCGGTATGGTTGATGCGCATCAGCCCGGCAATATGACG > 2:15064/1‑149 gaCCATGGAGCATGCCGCCGAGGAAGAAGTGGATCACCTGGCCTTGGTACAACGCCTGGGCGCAGACTTCACCGGTATGGTTGATGCGCATCAGCCCGGCAATATGACGGGCCTGCTGCTCGTCCAGGTCAGCGTCTGGCTGGACGATG < 1:15064/147‑1 CCTGGCCTTGGTACAACGCCTGGGCGCAGACTTCACCGGTATGGTTGATGCGCATCAGCCCGGCAATATGACGGGCCTGCTGCTCGTCCAGGTCAGCGTCTGGCTGGACGATGGCCGGCGATGGCCGGGTGGGTTGGCCGCTGAAGGGC < 6:2080/149‑1 CTGGCCTTGGTACAACGCCTGGGCGCAGACTTCACCGGTATGGTTGATGCGCATCAGCCCGGCAATATGACGGGCCTGCTGCTCGTCCAGGTCAGCGTCTGGCTGGACGATGGCCGGCGATGGCCGGGTGGGTTGGCCGCTGAAGGGCA < 3:106970/149‑1 CTTGGTACAACGCCTGGGCGCAGACTTCACCGGTATGGTTGATGCGCATCAGCCCGGCAATATGACGGGCCTGCTGCTCGTCCAGGTCAGCGTCTGGCTGGACGATGGCCGGCGATGGCCGGGTGGGTTGGCCGCTGAAGGGCAGCAAG < 3:102679/149‑1 CAGGCCCGTCATATTGCCGGGCTGATGCGCATCAACCATACCGGTGAAGTCTGCGCCCAGGCGTTGTACCAAGGCCAGGCCCTGACCGCCAAGCTGCCCGAAGTGCGCAAGGCCATGGAGCATGCCGCCGAGGAAGAAGTGGATCACCTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/515597‑515444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcctTGGTACAACGCCTGGGCGCAGACTTCACCGGTATGGTTGATGCGCATCAGCCCGGCAATATGACGGGCCTGCTGCTCGTCCAGGTCAGCGTCTGGCTGGACGATGGCCGGCGATGGCCGGGTGGGTTGGCCGCTGAAGGGCAGCAAG > NC_002947/515527‑515673 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |