| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 737380 = | 49 (0.880) | 5 (0.090) | 4/246 | NT | 9.7% | coding (471/708 nt) | PP_0629 | membrane protein |
| ? | NC_002947 | 737416 = | 46 (0.860) | coding (507/708 nt) | PP_0629 | membrane protein | |||||
GCACTTATCACCATGCCGTTGATGAACGCCTCGGGGAACATCATCAGCCACAGGTAGCCGACAAAGTCGCTGAGCCATTCCGGCAGGGCAAACCGCCCGTCGAGCCACAACACCCCTAGCGCCGCCGGTACGCAAACCAGCACGGTGAGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/737532‑737380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAGGCGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGA > NC_002947/737416‑737562 GCACTTATCACCATGCCGTTGATGAACGCCTCGGGGAACATCATCAGCCACAGGTAGCCGACAAAGTCGCTGAGCCATTCCGGCAGGGCAAACCGCCCGTCGAGCCACAACACCCCTAGCGCCGCCGGTACGCAAACCAGCACGGTGAG > 2:181750/1‑149 ACTTATCACCATGCCGTTGATGAACGCCTCGGGGAACATCATCAGCCACAGGTAGCCGACAAAGTCGCTGAGCCATTCCGGCAGGGCAAACCGCCCGTCGAGCCACAACACCCCTAGCGCCGCCGGTACGCAAACCAGCACGGTGAGCG > 5:158572/1‑149 CCTAGCGCCGCCGGTACGCAAACCAGCACGGTGAGCGCTAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAGGCGGTCATCAACGGCATGGTGA > 6:114943/1‑149 CCTAGCGCCGCCGGTACGCAAACCAGCACGGTGAGCGCTAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAGGC > 5:329399/1‑129 CCTAGCGCCGCCGGTACGCAAACCAGCACGGTGAGCGCTAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAGGC < 6:329399/129‑1 CTAGCGCCGCCGGTACGCAAACCAGCACGGTGAGCGCTAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAG < 5:216477/126‑1 CTAGCGCCGCCGGTACGCAAACCAGCACGGTGAGCGCTAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAG > 6:216477/1‑126 CGCTAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAGGCGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTG > 8:104435/1‑149 TAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAGGCGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGA > 1:83708/1‑148 GCACTTATCACCATGCCGTTGATGAACGCCTCGGGGAACATCATCAGCCACAGGTAGCCGACAAAGTCGCTGAGCCATTCCGGCAGGGCAAACCGCCCGTCGAGCCACAACACCCCTAGCGCCGCCGGTACGCAAACCAGCACGGTGAGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/737532‑737380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctAGGGGTGTTGTGGCTCGACGGGCGGTTTGCCCTGCCGGAATGGCTCAGCGACTTTGTCGGCTACCTGTGGCTGATGATGTTCCCCGAGGCGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGA > NC_002947/737416‑737562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |