New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 78703858 (1.050)4 (0.070) 4/250 NT 6.9% coding (156/1668 nt) ettA ADP/ATP ratio sensor/translation inhibitor
?NC_002947 = 787085 52 (0.960)coding (203/1668 nt) ettA ADP/ATP ratio sensor/translation inhibitor

AATACGTCTACACCATGCATCGGCTGAGCAAGGTCGTGCCGCCGAAGCGGGAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/786890‑787038
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgTCGGGCATCGGACGGGCTTCGCCGTCGAATTCCTTGTCGACGCCCGCCATGATCCGCAGCAGGGTCGATTTACCGGCGCCGTTCAGGCCAAGTACGCCAATCTTGGCGCCTGGGAAGAACGACAGGGAAATGTTCTTGAGAATTTC  <  NC_002947/787085‑786940
                                                                                                                                                                                                                                                                                                       
AATACGTCTACACCATGCATCGGCTGAGCAAGGTCGTGCCGCCGAAGCGGGAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCA                                                                                                                                                      <  5:107715/147‑1
                                     GCCGCCGAAGCGGGAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGTCGGGCATCGGACGGGCTTCGCCGTCGAATTCCTTGT                                                                                                               >  4:270164/1‑149
                                                 GGAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGTCGGGCATCGGACGGGCTTCGCCGTCGAATTCCTTGTCGACGCCCGCCA                                                                                                   <  3:270164/149‑1
                                                            AGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGTCGGGCATCGGACGGGCTTCGCCGTCGAATTCCTTGTCGACGCCCGCCATGATC                                                                                              <  5:344782/143‑1
                                                            AGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGTCGGGCATCGGACGGGCTTCGCCGTCGAATTCCTTGTCGACGCCCGCCATGATC                                                                                              >  6:344782/1‑143
                                                                                                                                                  ATGTCGGGCATCGGACGGGCTTCGCCGTCGAATTCCTTGTCGACGCCCGCCATGATCCGCAGCAGGGTCGATTTACCGGCGCCGTTCAGGCCAAGTACGCCAATCTTGGCGCCTGGGAAGAACGACAGGGAAATGTTCTTGAGAATTTC  <  1:83512/149‑1
                                                                                                                                                  ATGTCGGGCATCGGACGGGCTTCGCCGTCGAATTCCTTGTCGACGCCCGCCATGATCCGCAGCAGGGTCGATTTACCGGCGCCGTTCAGGCCAAGTACGCCAATCTTGGCGCCTGGGAAGAACGACAGGGAAATGTTCTTGAGAATTTC  <  5:78318/149‑1
                                                                                                                                                                                                                                                                                                       
AATACGTCTACACCATGCATCGGCTGAGCAAGGTCGTGCCGCCGAAGCGGGAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/786890‑787038
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgTCGGGCATCGGACGGGCTTCGCCGTCGAATTCCTTGTCGACGCCCGCCATGATCCGCAGCAGGGTCGATTTACCGGCGCCGTTCAGGCCAAGTACGCCAATCTTGGCGCCTGGGAAGAACGACAGGGAAATGTTCTTGAGAATTTC  <  NC_002947/787085‑786940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.