New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 787038 | 58 (1.050) | 4 (0.070) | 4/250 | NT | 6.9% | coding (156/1668 nt) | ettA | ADP/ATP ratio sensor/translation inhibitor |
? | NC_002947 | = 787085 | 52 (0.960) | coding (203/1668 nt) | ettA | ADP/ATP ratio sensor/translation inhibitor |
GGGAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTACGCCGAGCCGGATGCCG > NC_002947/786938‑787231 | gggAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGa > 5:180125/1‑148 (MQ=255) gAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGAcat < 1:83512‑M2/149‑4 (MQ=255) gAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGAcat < 5:78318‑M2/149‑4 (MQ=255) tcAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGATGGCGAAGCCCGTCCGATGCCCGACATCAACGTg > 6:94319/1‑149 (MQ=255) aaGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGATGGCGAAGCCCGTCCGATGCCCGACATCAACGTg < 5:94319/147‑1 (MQ=255) aaGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGt < 8:204849/146‑1 (MQ=255) aaGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTg < 3:259951/147‑1 (MQ=255) aGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGt < 8:40323/149‑1 (MQ=255) aTTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATc > 8:205683/1‑135 (MQ=255) aTTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATc < 7:205683/135‑1 (MQ=255) aTTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCt > 1:186839/1‑149 (MQ=255) ccTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCca < 3:67423/148‑1 (MQ=255) ccTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGACCGATGCCCGCCATCAACGTGGGTTACCTGCca > 7:331074/1‑148 (MQ=255) cTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCcaca < 2:186839/149‑1 (MQ=255) cccAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCCCacg > 5:320627/1‑147 (MQ=255) cAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTg > 7:105069/1‑149 (MQ=255) gcgcGAAGATTTGCGTACTTGGCCTGAACGGCGCCTGTAAATCGACCGTGCTGCGGATCATGGCGGGCGTCGACATGTAATTCGACGGCTAAGCCCGTCCGATGCCCGACATCAACGTGTGTTACCTGCCACAGGAACCTCAACTGGAc < 2:83512/149‑1 (MQ=255) cAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACccaa > 4:299924/1‑149 (MQ=255) cAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGGGGGTTACCTGCCACAGGAACCGCAACTGGACccaa < 4:328469/149‑1 (MQ=255) aGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACccaacc < 3:299924/149‑1 (MQ=255) gCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGAc < 3:127482/148‑1 (MQ=255) gCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACCTGGGTTACCTGCCACAGGAACCGCAACTGCAAccaaccaaaaa > 1:252202/1‑145 (MQ=255) tACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACcgtg > 7:327352/1‑149 (MQ=255) cTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACcgtgcg > 8:80693/1‑149 (MQ=255) ttGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACcgtgcgt > 1:261884/1‑149 (MQ=255) ggCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACcgtgcgtg > 6:126053/1‑148 (MQ=255) gCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGaa < 4:271656/149‑1 (MQ=255) tGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGc < 6:182/117‑1 (MQ=255) tGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGc > 5:182/1‑117 (MQ=255) tGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTg > 6:575/1‑149 (MQ=255) aaCGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTgg < 6:180125/148‑1 (MQ=255) aCGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGt < 5:575/148‑1 (MQ=255) ggCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGa < 1:271691/149‑1 (MQ=255) ggCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGa < 7:80693/149‑1 (MQ=255) cGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAg < 2:261884/149‑1 (MQ=255) gACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCg > 6:170854/1‑149 (MQ=255) ccTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTaa < 8:105069/149‑1 (MQ=255) tgcGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTAcc < 5:311318/75‑1 (MQ=255) tgcGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTAcc > 6:311318/1‑75 (MQ=255) gATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGAcatgatccgcagcagggtcgatttaccggcgccgttcaggccaagtacgccaatcttggcgcctgggaagaacgacagggaaatgttct < 5:344782‑M2/143‑90 (MQ=255) gATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGAcatgatccgcagcagggtcgatttaccggcgccgttcaggccaagtacgccaatcttggcgcctgggaagaacgacagggaaatgttct > 6:344782‑M2/1‑54 (MQ=255) tGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGAcatgatccgcagcagggtcgatttaccggcgccgttcaggccaagtacgccaatcttggcgcctgggaagaacgacagggaaatgttcttgagaatttcc < 3:270164‑M2/149‑101 (MQ=255) ggcgTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCg > 8:319041/1‑149 (MQ=255) cgTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGcc > 4:232324/1‑149 (MQ=255) aCAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGAcatgatccgcagcagggtcgatttaccggcgccgttcaggccaagtacgccaatcttggcgcctgggaagaacgacagggaaatgttcttgagaatttcccgcttcggcggc > 4:270164‑M2/1‑37 (MQ=255) aCAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGAc > 8:259579/1‑149 (MQ=255) aaGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCCACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGAc > 8:312009/1‑147 (MQ=255) aaGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGAc > 8:300833/1‑147 (MQ=255) aGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAg < 5:170854/149‑1 (MQ=255) ggAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAgg > 5:194801/1‑149 (MQ=255) ggAATTCGACGGCGAAGCCCGACCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTCGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAgg < 4:37938/149‑1 (MQ=255) gAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAg > 8:176115/1‑147 (MQ=255) gAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAg < 7:176115/147‑1 (MQ=255) aTTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTc > 1:49598/1‑148 (MQ=255) gAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTa > 3:179810/1‑149 (MQ=255) ccGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGt < 6:40078/78‑1 (MQ=255) ccGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGt > 5:40078/1‑78 (MQ=255) ccGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGa > 4:326201/1‑84 (MQ=255) tCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTACGCCGAGc < 4:179810/149‑1 (MQ=255) cGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTACGCCGAGCCg > 2:88126/1‑149 (MQ=255) gCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTACGCCGAGCCGGAt < 8:327352/148‑1 (MQ=255) ccGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTACGCCGAGCCGGATGcc < 7:319041/149‑1 (MQ=255) cGACATGAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTACGCCGAGCCGGATGCCg < 2:252202/149‑1 (MQ=255) cGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTACGCCGAGCCGGATGcc > 4:189758/1‑148 (MQ=255) | GGGAAATTCTCAAGAACATTTCCCTGTCGTTCTTCCCAGGCGCCAAGATTGGCGTACTTGGCCTGAACGGCGCCGGTAAATCGACCCTGCTGCGGATCATGGCGGGCGTCGACAAGGAATTCGACGGCGAAGCCCGTCCGATGCCCGACATCAACGTGGGTTACCTGCCACAGGAACCGCAACTGGACCCAACCAAGACCGTGCGTGAAGTGGTCGAGGAAGCGGTCAGCGTAATCAAGGACGCCCAGGCCCGCCTGGACGAGGTCTACGCGGCCTACGCCGAGCCGGATGCCG > NC_002947/786938‑787231 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |