| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 817844 | 44 (0.790) | 5 (0.090) | 4/246 | NT | 10.5% | coding (324/951 nt) | PP_0703 | transmembrane sensor |
| ? | NC_002947 | = 817882 | 43 (0.810) | coding (286/951 nt) | PP_0703 | transmembrane sensor | |||||
AGGCTGACCTCGCCATGGATCAGTTTCAGCTGGCGTTGCTCCGCGCTGTAGTGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/817692‑817844‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcCTGGGCTGGGCCGCGCGCGAACCGCTAGGCCTGCCACAGCTGCTGGCCGACACCAGCACTGCCACAGGCGAACGGCGCCAATGGCAAGGCAGTGACGGCAGCCGTCTGCAGCTCAACACCGCCAGTGCCATCGACTTGCACTACA < NC_002947/817882‑817738 AGGCTGACCTCGCCATGGATCAGTTTCAGCTGGCGTTGCTCCGCGCTGTAGTGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAG < 3:268167/149‑1AGGCTGACCTCGCCATGGATCAGTTTCAGCTGGCGTTGCTCCGCGCTGTAGTGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAG < 8:62579/149‑1 GGCTGACCTCGCCATGGATCAGTTTCAGCTGGCGTTGCTCCGCGCTGTAGTGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAGC < 1:329706/149‑1 ATCAGTTTCAGCTGGCGTTGCTCCGCGCTGTAGTGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAGCAGCCTGGGCTGGGCCGC > 3:234130/1‑149 TAGTGCAAGTCGATGGCACTGGCGGTGTTGATCTGCAGCCGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGTTGTCGGCCAGCAGCCTGGGCTGGGCCGCGCGCGAACCGCTAGGCCTGCCACAGCTGC < 4:247439/148‑1 GTGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAGCAGCCTGGGCTGGGCCGCGCGCGAACCGCTAGGCCTGCCACAGCTGCTGG < 4:234130/149‑1 GTGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAGCAGCCTGGGCTGGGCCGCGCGCGAACCGCTAGGCCTGCCACAGCTGCTGG < 5:28646/149‑1 TGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAGCAGCCTGGGCTGGGCCGCGCGCGAACCGCTAGGCCTGCCACAGCTGCTGGC < 1:288087/149‑1 CAGCCTGGGCTGGGCCGCGCGCGAACCGCTAGGCCTGCCACAGCTGCTGGCCGACACCAGCACTGCCACAGGCGAACGGCGCCAATGGCAAGGCAGTGACGGCAGCCGTCTGCAGCTCAACACCGCCAGTGCCATCGACTTGCACTACA < 7:209762/149‑1 AGGCTGACCTCGCCATGGATCAGTTTCAGCTGGCGTTGCTCCGCGCTGTAGTGCAAGTCGATGGCACTGGCGGTGTTGAGCTGCAGACGGCTGCCGTCACTGCCTTGCCATTGGCGCCGTTCGCCTGTGGCAGTGCTGGTGTCGGCCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/817692‑817844‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcCTGGGCTGGGCCGCGCGCGAACCGCTAGGCCTGCCACAGCTGCTGGCCGACACCAGCACTGCCACAGGCGAACGGCGCCAATGGCAAGGCAGTGACGGCAGCCGTCTGCAGCTCAACACCGCCAGTGCCATCGACTTGCACTACA < NC_002947/817882‑817738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |