| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1419958 = | 49 (0.880) | 3 (0.060) | 3/248 | NT | 5.6% | coding (55/366 nt) noncoding (83/90 nt) |
PP_1244 PP_mr17 |
hypothetical protein C4 ncRNA |
| ? | NC_002947 | 1420038 = | 54 (1.010) | noncoding (3/90 nt) | PP_mr17 | C4 ncRNA | |||||
GGCTCGTCGTTGCAAAATCAACGGCCGGCTTTGACAGGCCGACGATTTCCCGCACACGTGCACTGTTTATGGCGGCTGTACGTGGGGCACCTTCGTGTGCGCCGAGTTACTCCGGGATCCTCGGTCTGTCAACCCATGTACAGCTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1420106‑1419958‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaTAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGCCGTTGATTTTGCAACGACGAGCCGAGACTAGAGCGCGACCGAATCCGTCGCAACCGTTTGAGCGGGTTGGCAGTATGTTTGGGAAACGCCCTACAAGGAAGG > NC_002947/1420038‑1420185 GGCTCGTCGTTGCAAAATCAACGGCCGGCTTTGACAGGCCGACGATTTCCCGCACACGTGCACTGTTTATGGCGGCTGTACGTGGGGCACCTTCGTGTGCGCCGAGTTACTCCGGGATCCTCGGTCTGTCAACCCATGTACAGCTGC < 3:150772/147‑1GGCTCGTCGTTGCAAAATCAACGGCCGGCTTTGACAGGCCGACGATTTCCCGCACACGTGCACTGTTTATGGCGGCTGTACGTGGGGCACCTTCGTGTGCGCCGAGCTACTCCGGGATCCTCGGTCTGTCAACCCATGTACAGCTGC < 1:134758/147‑1 TTTATGGCGGCTGTACGTGGGGCACCTTCGTGTGCGCCGAGTTACTCCGGGATCCTCGGTCTGTCAACCCATGTACAGCTGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAACGCCGGCCGTTGATTTTGCACCGACG > 4:284808/1‑149 GGCGGCTGTACGTGGGGCACCTTCGTGTGCGCCGAGTTACTCCGGGATCCTCGGTCTGTCAACCCATGTACAGCTGCCATAAACAGTGCACGTGTGGGGGAAATCGTCGGCCTGTCAAAGCCGGC < 1:203284/125‑1 GGCGGCTGTACGTGGGGCACCTTCGTGTGCGCCGAGTTACTCCGGGATCCTCGGTCTGTCAACCCATGTACAGCTGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGC > 2:203284/1‑125 ATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGCCGTTGATTTTGCAACGACGAGCCGAGACTAGAGCGCGACCGAATCCGTCGCAACCGTTTGAGCGGGTTGGCAGTATGTTTGGGAAACGCCCTACAAGGAAGG > 2:117093/1‑149 ATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGCCGTTGATTTTGCAACGACGAGCCGAGACTAGAGCGCGACCGAATCCGTCGCAACCGTTTGAGCGGGTTGGCAGTATGTTTGGGAAACGCCCTACAAGGAAGG > 8:154160/1‑149 GGCTCGTCGTTGCAAAATCAACGGCCGGCTTTGACAGGCCGACGATTTCCCGCACACGTGCACTGTTTATGGCGGCTGTACGTGGGGCACCTTCGTGTGCGCCGAGTTACTCCGGGATCCTCGGTCTGTCAACCCATGTACAGCTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1420106‑1419958‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaTAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGCCGTTGATTTTGCAACGACGAGCCGAGACTAGAGCGCGACCGAATCCGTCGCAACCGTTTGAGCGGGTTGGCAGTATGTTTGGGAAACGCCCTACAAGGAAGG > NC_002947/1420038‑1420185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |