New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1472574 = | 41 (0.740) | 3 (0.060) | 3/246 | NT | 6.8% | coding (253/1491 nt) | alg8 | glycosyltransferase Alg8 |
? | NC_002947 | 1472611 = | 43 (0.810) | coding (216/1491 nt) | alg8 | glycosyltransferase Alg8 |
ATATCTTCGACTCGCAGTCGAAGCACTTCATCTTCCTGGTCGGCGCAGTCGGCATCTGGCGCTACTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1472726‑1472574 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAT > NC_002947/1472611‑1472754 ATATCTTCGACTCGCAGTCGAAGCACTTCATCTTCCTGGTCGGCGCAGTCGGCATCTGGCGCTACTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATG < 8:223937/149‑1 TATCTTCGACTCGCAGTCGAAGCACTTCATCTTCCTGGTCGGCGCAGTCGGCATCTGGCGCTACTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGG < 1:116583/149‑1 ATCTTCGACTCGCAGTCGAAGCACTTCATCTTACTGGTCGGCGCAGTCGGCATCTGGCGCTACTCCATGGGCGCTACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGG > 4:81787/1‑149 TCTTCGACTCGCAGTCGAAGCACTTCATCTTCCTGGTCGGCGCAGTCGGCATCTGGCGCTACTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGG < 3:273814/148‑1 CTTCGACTCGCAGTCGAAGCACTTCATCTTCCTGGTCGGCGCAGTCGGCATCTGGCGCTACTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGT > 4:190651/1‑148 GTCGGCGCAGTCGGCATCTGGCGCAACTCCAAGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTATACCGCGAGTACCCGTACCTCCGCCGCAAGGTGCAGAAAATGG > 7:221104/1‑112 TACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGC > 7:162756/1‑149 GCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGT > 3:284726/1‑149 CCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGAT < 4:284726/149‑1 GGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAT > 5:367009/1‑149 GTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCAGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAT > 5:278209/1‑147 ATATCTTCGACTCGCAGTCGAAGCACTTCATCTTCCTGGTCGGCGCAGTCGGCATCTGGCGCTACTCCATGGGCGCCACCCATTTCATCCGCGGCATGATCTTCCTCTACGGCGTGTACCCGTACCTGCGCCGCAAGGTGCAGAAAATGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1472726‑1472574 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAT > NC_002947/1472611‑1472754 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |