New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1472574 =41 (0.740)3 (0.060) 3/246 NT 6.8% coding (253/1491 nt) alg8 glycosyltransferase Alg8
?NC_002947 1472611 = 43 (0.810)coding (216/1491 nt) alg8 glycosyltransferase Alg8

AGCCGCAGTTGATCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAT  >  NC_002947/1472463‑1472754
                                                                                                                                                    |                                                                                                                                               
aGCCGCAGTTGATCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTac                                                                                                                                                 <  1:87266/149‑1 (MQ=255)
    gCAGTTGATCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGc                                                                                                                                             >  3:190651/1‑149 (MQ=255)
    actcgcagtcgaagcacttcatcttcctggtcggcgcagtcggcatctggcgctactccatgggcgccacccatttcatccgcggcatgatcttcctctacggcgtgTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGc                                                                                                                                             >  3:284726‑M1/108‑149 (MQ=255)
        gcagtcgaagcacttcatcttcctggtcggcgcagtcggcatctggcgctactccatgggcgccacccatttcatccgcggcatgatcttcctctacggcgtgTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTa                                                                                                                                         >  7:162756‑M1/104‑149 (MQ=255)
            tCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTagag                                                                                                                                      >  5:359236/1‑148 (MQ=255)
              gCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGa                                                                                                                                    <  3:251047/148‑1 (MQ=255)
                cTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGa                                                                                                                                 <  8:46292/149‑1 (MQ=255)
                 tCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAgg                                                                                                                                     >  1:241923/1‑144 (MQ=255)
                                  gTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAAt                                                                                                               >  5:354533/1‑149 (MQ=255)
                                   tACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGaaa                                                                                                                <  5:351385/147‑1 (MQ=255)
                                   tACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATg                                                                                                              >  3:81787/1‑149 (MQ=255)
                                      acCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGt                                                                                                           >  8:274063/1‑149 (MQ=255)
                                        cTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATggg                                                                                                            <  1:151673/146‑1 (MQ=255)
                                        cTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATggg                                                                                                            >  2:151673/1‑146 (MQ=255)
                                             cGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGccc                                                                                                    <  3:73083/149‑1 (MQ=255)
                                                   tCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAg                                                                                              >  4:63584/1‑149 (MQ=255)
                                                    cAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAg                                                                                              >  5:352872/1‑148 (MQ=255)
                                                              aTACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGAt                                                                                   >  7:315491/1‑149 (MQ=255)
                                                                 cGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGc                                                                                 <  7:274063/148‑1 (MQ=255)
                                                                  ggAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGcc                                                                                <  6:319638/148‑1 (MQ=255)
                                                                  ggAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGcc                                                                                >  5:319638/1‑148 (MQ=255)
                                                                       cttgTGACCATCAGGTAGACATTCGAAGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACttc                                                                          <  6:359236/146‑3 (MQ=255)
                                                                       cTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTgc                                                                          >  8:171805/1‑149 (MQ=255)
                                                                          gTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTgcg                                                                         <  3:63584/147‑1 (MQ=255)
                                                                          gTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGcc                                                                       >  2:358495/1‑149 (MQ=255)
                                                                                    gttAGCCATGCGACGGGTCGGTGGCATTACCCAGTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCCTGCCGCGGATTAAATGGGTGGCGCCCATGGAGTTGCGCCAGATGCCGACTGCGCCGACCAGGAAg                                                             <  8:102963/147‑1 (MQ=255)
                                                                                    ggTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGa                                                                                               >  7:4064/1‑115 (MQ=255)
                                                                                    ggTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGa                                                                                               <  8:4064/115‑1 (MQ=255)
                                                                                     gTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAgg                                                                >  8:8712/1‑145 (MQ=255)
                                                                                         aCATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGaa                                                        <  8:315491/149‑1 (MQ=255)
                                                                                           aTGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGt                                                      >  3:222660/1‑149 (MQ=255)
                                                                                                aCGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTc                                                 <  4:222660/149‑1 (MQ=255)
                                                                                                   ggTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGAc                                              <  7:8712/149‑1 (MQ=255)
                                                                                                      tacggcgtgtacccgtacctgcgccgcaaggtgcagaaaatgggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGc                                           >  7:162756‑M2/47‑149 (MQ=255)
                                                                                                       ggTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGc                                           <  2:241923/148‑1 (MQ=255)
                                                                                                       ggTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGc                                           >  2:312751/1‑148 (MQ=255)
                                                                                                         tGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGa                                                            <  4:338044/129‑1 (MQ=255)
                                                                                                         tGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGa                                                            >  3:338044/1‑129 (MQ=255)
                                                                                                          gcgtgtacccgtacctgcgccgcaaggtgcagaaaatgggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGt                                       >  3:284726‑M2/43‑149 (MQ=255)
                                                                                                           gCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCTGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGaa                                                        <  1:151908/131‑1 (MQ=255)
                                                                                                           gCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCTGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGaa                                                        >  2:151908/1‑131 (MQ=255)
                                                                                                            cATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTc                                      >  2:154627/1‑148 (MQ=255)
                                                                                                              ttACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGaa                                   <  1:257428/149‑1 (MQ=255)
                                                                                                                ACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAg                                  >  4:190651‑M1/1‑148 (MQ=255)
                                                                                                                 cccgtacctgcgccgcaaggtgcagaaaatgggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGat                                <  4:284726‑M2/114‑1 (MQ=255)
                                                                                                                 CCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGa                                 <  3:273814‑M1/148‑1 (MQ=255)
                                                                                                                 CCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTAGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGTAAGATGAAGTGCTTCGACTGCGAGTCGAAGat                                >  4:81787‑M1/1‑149 (MQ=255)
                                                                                                                  CCATTTTCTGCACCTTGCGGCGGAGGTACGGGTACTCGCGGTATAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCTTGGAGTTGCGCCAGATGCCGACTGCGCCGAc                                                                    >  7:221104‑M1/1‑112 (MQ=255)
                                                                                                                  CCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGata                               <  1:116583‑M1/149‑1 (MQ=255)
                                                                                                                   CATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGatat                              <  8:223937‑M1/149‑1 (MQ=255)
                                                                                                                           gCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTCGCAGTCGAAgc                                 <  5:131060/138‑2 (MQ=255)
                                                                                                                           gCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTCGCAGTCGAAgc                                 >  6:131060/1‑137 (MQ=255)
                                                                                                                            cACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTgg                       >  2:200800/1‑147 (MQ=255)
                                                                                                                              ccTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGcagg                   <  7:171805/149‑1 (MQ=255)
                                                                                                                              ccTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGcagg                   <  1:312751/149‑1 (MQ=255)
                                                                                                                                   cggcgCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGcagggccag              <  6:352872/149‑1 (MQ=255)
                                                                                                                                              cGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCa   <  4:273814/149‑1 (MQ=255)
                                                                                                                                               gggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAt  >  5:367009‑M2/6‑149 (MQ=255)
                                                                                                                                                 gtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCAGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAt  >  5:278209‑M2/4‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
AGCCGCAGTTGATCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAT  >  NC_002947/1472463‑1472754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.