New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1472574 = | 41 (0.740) | 3 (0.060) | 3/246 | NT | 6.8% | coding (253/1491 nt) | alg8 | glycosyltransferase Alg8 |
? | NC_002947 | 1472611 = | 43 (0.810) | coding (216/1491 nt) | alg8 | glycosyltransferase Alg8 |
AGCCGCAGTTGATCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAT > NC_002947/1472463‑1472754 | aGCCGCAGTTGATCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTac < 1:87266/149‑1 (MQ=255) gCAGTTGATCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGc > 3:190651/1‑149 (MQ=255) actcgcagtcgaagcacttcatcttcctggtcggcgcagtcggcatctggcgctactccatgggcgccacccatttcatccgcggcatgatcttcctctacggcgtgTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGc > 3:284726‑M1/108‑149 (MQ=255) gcagtcgaagcacttcatcttcctggtcggcgcagtcggcatctggcgctactccatgggcgccacccatttcatccgcggcatgatcttcctctacggcgtgTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTa > 7:162756‑M1/104‑149 (MQ=255) tCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTagag > 5:359236/1‑148 (MQ=255) gCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGa < 3:251047/148‑1 (MQ=255) cTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGa < 8:46292/149‑1 (MQ=255) tCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAgg > 1:241923/1‑144 (MQ=255) gTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAAt > 5:354533/1‑149 (MQ=255) tACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGaaa < 5:351385/147‑1 (MQ=255) tACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATg > 3:81787/1‑149 (MQ=255) acCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGt > 8:274063/1‑149 (MQ=255) cTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATggg < 1:151673/146‑1 (MQ=255) cTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATggg > 2:151673/1‑146 (MQ=255) cGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGccc < 3:73083/149‑1 (MQ=255) tCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAg > 4:63584/1‑149 (MQ=255) cAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAg > 5:352872/1‑148 (MQ=255) aTACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGAt > 7:315491/1‑149 (MQ=255) cGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGc < 7:274063/148‑1 (MQ=255) ggAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGcc < 6:319638/148‑1 (MQ=255) ggAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGcc > 5:319638/1‑148 (MQ=255) cttgTGACCATCAGGTAGACATTCGAAGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACttc < 6:359236/146‑3 (MQ=255) cTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTgc > 8:171805/1‑149 (MQ=255) gTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTgcg < 3:63584/147‑1 (MQ=255) gTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGcc > 2:358495/1‑149 (MQ=255) gttAGCCATGCGACGGGTCGGTGGCATTACCCAGTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCCTGCCGCGGATTAAATGGGTGGCGCCCATGGAGTTGCGCCAGATGCCGACTGCGCCGACCAGGAAg < 8:102963/147‑1 (MQ=255) ggTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGa > 7:4064/1‑115 (MQ=255) ggTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGa < 8:4064/115‑1 (MQ=255) gTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAgg > 8:8712/1‑145 (MQ=255) aCATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGaa < 8:315491/149‑1 (MQ=255) aTGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGt > 3:222660/1‑149 (MQ=255) aCGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTc < 4:222660/149‑1 (MQ=255) ggTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGAc < 7:8712/149‑1 (MQ=255) tacggcgtgtacccgtacctgcgccgcaaggtgcagaaaatgggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGc > 7:162756‑M2/47‑149 (MQ=255) ggTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGc < 2:241923/148‑1 (MQ=255) ggTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGc > 2:312751/1‑148 (MQ=255) tGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGa < 4:338044/129‑1 (MQ=255) tGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGa > 3:338044/1‑129 (MQ=255) gcgtgtacccgtacctgcgccgcaaggtgcagaaaatgggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGt > 3:284726‑M2/43‑149 (MQ=255) gCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCTGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGaa < 1:151908/131‑1 (MQ=255) gCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCTGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGaa > 2:151908/1‑131 (MQ=255) cATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTc > 2:154627/1‑148 (MQ=255) ttACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGaa < 1:257428/149‑1 (MQ=255) ACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAg > 4:190651‑M1/1‑148 (MQ=255) cccgtacctgcgccgcaaggtgcagaaaatgggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGat < 4:284726‑M2/114‑1 (MQ=255) CCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGa < 3:273814‑M1/148‑1 (MQ=255) CCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTAGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGTAAGATGAAGTGCTTCGACTGCGAGTCGAAGat > 4:81787‑M1/1‑149 (MQ=255) CCATTTTCTGCACCTTGCGGCGGAGGTACGGGTACTCGCGGTATAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCTTGGAGTTGCGCCAGATGCCGACTGCGCCGAc > 7:221104‑M1/1‑112 (MQ=255) CCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGata < 1:116583‑M1/149‑1 (MQ=255) CATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGatat < 8:223937‑M1/149‑1 (MQ=255) gCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTCGCAGTCGAAgc < 5:131060/138‑2 (MQ=255) gCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTCGCAGTCGAAgc > 6:131060/1‑137 (MQ=255) cACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTgg > 2:200800/1‑147 (MQ=255) ccTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGcagg < 7:171805/149‑1 (MQ=255) ccTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGcagg < 1:312751/149‑1 (MQ=255) cggcgCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGcagggccag < 6:352872/149‑1 (MQ=255) cGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCa < 4:273814/149‑1 (MQ=255) gggtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAt > 5:367009‑M2/6‑149 (MQ=255) gtaCACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCAGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAt > 5:278209‑M2/4‑147 (MQ=255) | AGCCGCAGTTGATCGCCTCGCGGATCACCGAGCTGTACACCTGGGCGGTGGTCAGCGCTTCGATACGGAAGCTGGTGACCATCAGGTAGACATGCGACGGGTCGGTGGCATTACCCATTTTCTGCACCTTGCGGCGCAGGTACGGGTACACGCCGTAGAGGAAGATCATGCCGCGGATGAAATGGGTGGCGCCCATGGAGTAGCGCCAGATGCCGACTGCGCCGACCAGGAAGATGAAGTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCAT > NC_002947/1472463‑1472754 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |