| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1477924 | 58 (1.050) | 5 (0.090) | 4/244 | NT | 8.1% | coding (578/1395 nt) | PP_1291 | PhoH family protein |
| ? | NC_002947 | = 1477949 | 58 (1.100) | coding (603/1395 nt) | PP_1291 | PhoH family protein | |||||
ATCAACATGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGTGAGCAAGGTCGATACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1477776‑1477924‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacccgATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGACCTTGCTCACGCGGTCCCAGAACGAGCCGGTGACCGAATGGTAGCCCTTGGACAGCAAGGACACGTCATCGACCAGTTGGTCGGTGCTGTAGTCCTCAGCCGCTATACCG < NC_002947/1477949‑1477805 ATCAACATGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGTGAGCAAGGTCGATACCCG > 8:333620/1‑149 TTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGTGAGCAAGGTCGATACCCGATGCCAGGTGCGGCCGCGCTCCTGGC > 8:214219/1‑149 AGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGTGAGCAAGGTCGATACCCGATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGA < 1:7338/149‑1 GCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGTGAGCAAGGTCGATACCCGATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGAC < 7:214219/149‑1 CTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGTGAGCAAGGTCGATACCCGATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGA < 5:13516/104‑1 CTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGTGAGCAAGGTCGATACCCGATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGA > 6:13516/1‑104 CCCGATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGACCTTGCTCACGCGGTCCCAGAACGAGCCGGTGACCGAATGGTAGCCCTTGGACAGCAAGGACACGTCATCGCCCAGTTGGTCGGTGCTGTAGTCCTCAGCCGCTATACCG > 3:339033/1‑149 CCCGATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGACCTTGCTCACGCGGTCCCAGAACGAGCCGGTGACCGAATGGTAGCCCTTGGACAGCAAGGACACGTCATCGACCAGTTGGTCGGTGCTGTAGTCCTCAGCCGCTATACC < 2:242225/148‑1 CCGATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGACCTTGCTCACGCGGTCCCAGAACGAGCCGGTGACCGAATGGTAGCCCTTGGACAGCAAGGACACGTCATCGACCAGTTGGTCGGTGCTGTAGTCCTCAGCCGCTATACCG > 7:225557/1‑148 ATCAACATGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGTGAGCAAGGTCGATACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1477776‑1477924‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacccgATGCCAGGTGCGGCCGCGCTCCTGGCGGGTATCGACCTTGCTCACGCGGTCCCAGAACGAGCCGGTGACCGAATGGTAGCCCTTGGACAGCAAGGACACGTCATCGACCAGTTGGTCGGTGCTGTAGTCCTCAGCCGCTATACCG < NC_002947/1477949‑1477805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |