New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1477924	58 (1.050)	5 (0.090)	4/244	NT	8.1%	coding (578/1395 nt)	PP_1291	PhoH family protein
	?	NC_002947	= 1477949	58 (1.100)					coding (603/1395 nt)	PP_1291	PhoH family protein

ATCAACATGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACTGCTGCTACTCGACCTGCAC  >  NC_002947/1477776‑1478072                                                                                                                                                      |                                                                                                                                                     aTCAACATGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCG                                                                                                                                                      >  8:333620‑M1/1‑149 (MQ=255)   cAACATGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGc                                                                                                                                                     >  3:331524/1‑148 (MQ=255)    aaCATGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCa                                                                                                                                                   <  4:186392/149‑1 (MQ=255)       aTGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGa                                                                                                                                                <  5:195122/149‑1 (MQ=255)            ccTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGcgcg                                                                                                                                           <  2:135946/149‑1 (MQ=255)                   gcgcgcgcTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCAc                                                                                                                                    >  4:44806/1‑149 (MQ=255)                    cgcgcgcTTGCGGTATAGCGGCTGATGACTACAGCAACGACCAACTGGTCGATGACGTGGCCTTTCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGCGGTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCAc                                                                                                                                    <  1:65198/149‑1 (MQ=255)                     gcgcgcTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCt                                                                                                                                  >  7:200517/1‑149 (MQ=255)                       gcgcTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTgg                                                                                                                                >  6:328219/1‑149 (MQ=255)                        cgcTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGc                                                                                                                               <  6:100666/149‑1 (MQ=255)                           ttGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGatgccaggtgcggccgcgctcctggc                                                                                                                            >  8:214219‑M1/1‑123 (MQ=255)                              cGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATcgg                                                                                                                          >  7:225557‑M2/1‑145 (MQ=255)                              cGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGGCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATcggg                                                                                                                         >  3:339033‑M2/1‑145 (MQ=255)                               ggTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATcggg                                                                                                                         <  2:242225‑M2/148‑5 (MQ=255)                                    aGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGatgccaggtgcggccgcgctcctggcgggtatcga                                                                                                                   <  1:7338‑M1/149‑36 (MQ=255)                                     gCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGatgccaggtgcggccgcgctcctggcgggtatcgac                                                                                                                  <  7:214219‑M1/149‑37 (MQ=255)                                     gCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAgat                                                                                                                  <  4:331524/149‑1 (MQ=255)                                        gCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAgatgat                                                                                                               <  7:287360/149‑1 (MQ=255)                                         cTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATc                                                                                                              <  4:90125/149‑1 (MQ=255)                                         cTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCCGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATc                                                                                                              <  4:85225/149‑1 (MQ=255)                                              gACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACaa                                                                                                         <  3:44806/149‑1 (MQ=255)                                                   cAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCt                                                                                                      <  5:328219/147‑1 (MQ=255)                                                   cAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGc                                                                                                    <  6:275683/149‑1 (MQ=255)                                                    aGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGcc                                                                                                   <  1:242225/149‑1 (MQ=255)                                                         cGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCg                                                                                              >  7:209063/1‑149 (MQ=255)                                                          gACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGt                                                                                             >  8:96347/1‑149 (MQ=255)                                                            ccAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGc                                                                                           <  8:200517/149‑1 (MQ=255)                                                                  ggTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTc                                                                                      >  6:207591/1‑148 (MQ=255)                                                                   gTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGa                                                                                                                                                <  5:237291/89‑1 (MQ=255)                                                                   gTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGa                                                                                                                                                >  6:237291/1‑89 (MQ=255)                                                                    tCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAAc                                                                                   <  8:209063/149‑1 (MQ=255)                                                                    tCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAAc                                                                                   <  7:96347/149‑1 (MQ=255)                                                                      gATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGa                                                                                 <  5:207591/149‑1 (MQ=255)                                                                            gtgtCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTtcat                                                                           >  1:258330/1‑149 (MQ=255)                                                                            gtgtCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCAGCACCTGGCATCGGGGACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTtca                                                                            >  8:60564/1‑148 (MQ=255)                                                                                 cTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGatgccaggtgcggccgcgctcctggcgggtatcga                                                                                                                   >  6:13516‑M1/1‑69 (MQ=255)                                                                                 cTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGatgccaggtgcggccgcgctcctggcgggtatcga                                                                                                                   <  5:13516‑M1/104‑36 (MQ=255)                                                                                 cTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCatcatc                                                                       >  4:144221/1‑148 (MQ=255)                                                                                  ttGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATAATCGa                                                                     >  6:233771/1‑149 (MQ=255)                                                                                                cTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAgatgat                                                                                                               >  3:321339/1‑93 (MQ=255)                                                                                                cTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAgatgat                                                                                                               <  4:321339/93‑1 (MQ=255)                                                                                                 tACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTtcgt                                                      >  8:43099/1‑149 (MQ=255)                                                                                                           tCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCCGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGAt                                             >  4:172002/1‑148 (MQ=255)                                                                                                            cACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATc                                            >  2:11717/1‑148 (MQ=255)                                                                                                              ccGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAg                                         >  6:29169/1‑149 (MQ=255)                                                                                                               cGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAgg                                        >  7:110210/1‑149 (MQ=255)                                                                                                               cGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAgg                                        >  4:121086/1‑149 (MQ=255)                                                                                                               cGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAgg                                        <  2:258330/149‑1 (MQ=255)                                                                                                                 gCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGc                                      <  5:29169/149‑1 (MQ=255)                                                                                                                     gTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGt                                                 <  8:147784/134‑1 (MQ=255)                                                                                                                     gTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGt                                                 >  7:147784/1‑134 (MQ=255)                                                                                                                         tGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTtcgtc                                                     >  1:93212/1‑126 (MQ=255)                                                                                                                         tGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTtcgtc                                                     <  2:93212/126‑1 (MQ=255)                                                                                                                         tGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAgg                                        >  8:132492/1‑139 (MQ=255)                                                                                                                         tGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAgg                                        <  7:132492/139‑1 (MQ=255)                                                                                                                          gggACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGCCAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTgac                             >  2:268922/1‑149 (MQ=255)                                                                                                                            gACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTgacga                           >  2:218684/1‑149 (MQ=255)                                                                                                                            gACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTgacga                           <  3:144221/149‑1 (MQ=255)                                                                                                                                       gCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCCGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAActgctg                 <  3:172002/149‑1 (MQ=255)                                                                                                                                        cAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGAt                                             <  2:150472/120‑1 (MQ=255)                                                                                                                                        cAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGAt                                             >  1:150472/1‑120 (MQ=255)                                                                                                                                        cAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAActg                    <  6:2256/145‑1 (MQ=255)                                                                                                                                        cAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAActg                    >  5:2256/1‑145 (MQ=255)                                                                                                                                        cAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACtgctgc                <  7:333620/149‑1 (MQ=255)                                                                                                                                        cAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACtgctgc                <  8:110210/149‑1 (MQ=255)                                                                                                                                        cAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACtgctgc                >  3:233540/1‑149 (MQ=255)                                                                                                                                            gTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATcgggtatcgaccttgctcacgcggtcccagaacgagccggtgaccgaatggtagcccttggacagcaaggacacgtcatcgaccagttggtcggtgctgtagtcctcagccgc            <  7:214219‑M2/149‑114 (MQ=255)                                                                                                                                             tCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATcgggtatcgaccttgctcacgcggtcccagaacgagccggtgaccgaatggtagcccttggacagcaaggacacgtcatcgaccagttggtcggtgctgtagtcctcagccgct           <  1:7338‑M2/149‑115 (MQ=255)                                                                                                                                             tCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATcgggtatcgaccttgctcacgcggtcccagaacgagccggtgaccgaatggtagcccttggacagcaag                                                        <  5:13516‑M2/104‑70 (MQ=255)                                                                                                                                             tCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATcgggtatcgaccttgctcacgcggtcccagaacgagccggtgaccgaatggtagcccttggacagcaag                                                        >  6:13516‑M2/1‑35 (MQ=255)                                                                                                                                             tCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTgacga                           >  5:210271/1‑133 (MQ=255)                                                                                                                                             tCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTgacga                           <  6:210271/133‑1 (MQ=255)                                                                                                                                               gATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACTGCTGCTACTCGa         <  3:121086/149‑1 (MQ=255)                                                                                                                                                  aCCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACTGCTGCTACTCGACCt      >  7:286984/1‑149 (MQ=255)                                                                                                                                                   cccGatgccaggtgcggccgcgctcctggcgggtatcgaccttgctcacgcggtcccagaacgagccggtgaccgaatggtagcccttggacagcaaggacacgtcatcgcccagttggtcggtgctgtagtcctcagccgctataccg     >  3:339033‑M1/1‑4 (MQ=255)                                                                                                                                                   cccGatgccaggtgcggccgcgctcctggcgggtatcgaccttgctcacgcggtcccagaacgagccggtgaccgaatggtagcccttggacagcaaggacacgtcatcgaccagttggtcggtgctgtagtcctcagccgctatacc      <  2:242225‑M1/148‑145 (MQ=255)                                                                                                                                                   cccGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACTGCTGCTACTCGACCTg     <  1:218684/149‑1 (MQ=255)                                                                                                                                                    ccGatgccaggtgcggccgcgctcctggcgggtatcgaccttgctcacgcggtcccagaacgagccggtgaccgaatggtagcccttggacagcaaggacacgtcatcgaccagttggtcggtgctgtagtcctcagccgctataccg     >  7:225557‑M1/1‑3 (MQ=255)                                                                                                                                                      gCCAGGAGCGCGGCCGCACCTGGCATcgggtatcgaccttgctcacgcggtcccagaacgagccggtgaccgaatggtagcccttggacagcaaggacacgtcatcgaccagttggtcggtgctgtagtcctcagccgctataccgcaa  >  8:214219‑M2/1‑26 (MQ=255)                                                                                                                                                      gCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCggg                                                  >  4:167997/1‑101 (MQ=255)                                                                                                                                                      gCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCggg                                                  <  3:167997/101‑1 (MQ=255)                                                                                                                                                      gCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACTGCTGCTACTCGAc        <  7:262656/143‑1 (MQ=255)                                                                                                                                                      gCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACTGCTGCTACTCGAc        >  8:262656/1‑143 (MQ=255)                                                                                                                                                      |                                                                                                                                                     ATCAACATGCGCCTGAAGGCGCGCGCTTGCGGTATAGCGGCTGAGGACTACAGCACCGACCAACTGGTCGATGACGTGTCCTTGCTGTCCAAGGGCTACCATTCGGTCACCGGCTCGTTCTGGGACCGC‑GTGAGCAAGGTCGATACCCGCCAGGAGCGCGGCCGCACCTGGCATCGGGTACAGATGATCGACAACCTGCCAGCCGTGCACGTCAACGAGTTCATCATCGATGAGCAGGGCTTCGTCGGGTGGATCAAGGGCATTCGTGACGACGAACTGCTGCTACTCGACCTGCAC  >  NC_002947/1477776‑1478072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.