| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1536092 = | 63 (1.140) | 3 (0.060) | 3/242 | NT | 5.3% | coding (1101/1218 nt) | argJ | glutamate N‑acetyltransferase/amino acid acetyltransferase |
| ? | NC_002947 | 1536130 = | 48 (0.920) | coding (1139/1218 nt) | argJ | glutamate N‑acetyltransferase/amino acid acetyltransferase | |||||
GGCGTGCCCGCGAAGAGGCCTTCGGATCAGTAGATCAGGTACGGTACTCGGCGTTGATCTTCACGTACTCGTGGGACAGGTCAGTCGTCCAGATGGTTTCGCTGCACTGGCCACGGCCCAGTTCGATTCGGATGGTGATCTCTTCCTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1536243‑1536092‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggccGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCTGCAG > NC_002947/1536130‑1536272 GGCGTGCCCGCGAAGAGGCCTTCGGATCAGTAGATCAGGTACGGTACTCGGCGTTGATCTTCACGTACTCGTGGGACAGGTCAGTCGTCCAGATGGTTTCGCTGCACTGGCCACGGCCCAGTTCGATTCGGATGGTGATCTCTTCCTGG > 4:140870/1‑149GGCGTGCCCGCGAAGAGGCCTTCGGATCAGTAGATCAGGTACGGTACTCGGCGTTGATCTTCACGTACTCGTGGGACAGGTCAGTCGTCCAGATGGTTTCGCTGCACTGGCCACGGCCCAGTTCGATTCGGATGGTGATCTCTTCCTGG < 4:351030/149‑1GGCGTGCCCGCGAAGAGGCCTTCGGATCAGTAGATCAGGTACGGTACTCGGCGTTGATCTTCACGTACTCGTGGGACAGGTCAGTCGTCCAGATGGTTTCGCTGCACTGGCCACGGCCCAGTTCGATTCGGATGGTGATCTCTTCCTGG < 5:35292/149‑1 TCACGTACTCGTGGGACAGGTCAGTCGTCCAGATGGTTTCGCTGCACTGGCCACGGCCCAGTTCGATTCGGATGGTGATCTCTTCCTGGGCC < 3:187541/92‑1 TCACGTACTCGTGGGACAGGTCAGTCGTCCAGATGGTTTCGCTGCACTGGCCACGGCCCAGTTCGATTCGGATGGTGATCTCTTCCTGGGCC > 4:187541/1‑92 CACGGCCCAGTTCGATTCGGATGGTGATCTCTTCCTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGG > 3:128909/1‑148 AGTTCGATTCGGATGGTGATCTCTTCCTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTG < 1:173953/86‑1 AGTTCGATTCGGATGGTGATCTCTTCCTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTG > 2:173953/1‑86 TGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAAT < 5:118347/141‑1 TGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAAT > 6:118347/1‑141 GGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCTGCAG > 5:172769/1‑148 GGCGTGCCCGCGAAGAGGCCTTCGGATCAGTAGATCAGGTACGGTACTCGGCGTTGATCTTCACGTACTCGTGGGACAGGTCAGTCGTCCAGATGGTTTCGCTGCACTGGCCACGGCCCAGTTCGATTCGGATGGTGATCTCTTCCTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1536243‑1536092‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggccGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCTGCAG > NC_002947/1536130‑1536272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |