New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1536092 = | 63 (1.140) | 3 (0.060) | 3/242 | NT | 5.3% | coding (1101/1218 nt) | argJ | glutamate N‑acetyltransferase/amino acid acetyltransferase |
? | NC_002947 | 1536130 = | 48 (0.920) | coding (1139/1218 nt) | argJ | glutamate N‑acetyltransferase/amino acid acetyltransferase |
CCGGAGCTGGATGTGAGCCTGATCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCTGCAG > NC_002947/1535985‑1536272 | ccgcgaagaggccttcggatcagtagatcaggtacggtactcggcgttgatcttcacgtactcgtgggacaggtcagtcgtccagatggtttcgctgcactggccacGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTg > 3:128909‑M1/108‑148 (MQ=255) tgAGCCTGATCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGaa < 3:314085/149‑1 (MQ=255) gAGCCTGATCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGaaa > 5:303132/1‑149 (MQ=255) gAGCCTGATCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGaaa > 6:50605/1‑149 (MQ=255) gAGCCTGATCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGaaa > 3:287307/1‑149 (MQ=255) ccTGATCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGCTCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAAcc > 8:118316/1‑148 (MQ=255) gATCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCt > 4:242958/1‑149 (MQ=255) aTCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATc < 5:50605/147‑1 (MQ=255) aTGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGCAGCGCAGGGTTCGGCAGTGATGGACCAGGATGAGATCACCCTCAGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGgac > 6:268774/1‑148 (MQ=255) aTGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCGCCCTCCGAATCGAACTGGGCCGTGGCCAGTGCAGGGAAACGCTCTGgccg > 8:294896/1‑149 (MQ=255) gTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGgacgac > 6:55680/1‑149 (MQ=255) tttACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACt < 7:118316/149‑1 (MQ=255) ttACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACt < 7:214399/148‑1 (MQ=255) aCCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGa < 3:242958/148‑1 (MQ=255) ccTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGAc < 6:283751/148‑1 (MQ=255) ggACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTg < 8:127192/120‑1 (MQ=255) ggACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTg > 7:127192/1‑120 (MQ=255) aGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCa > 2:9212/1‑149 (MQ=255) gCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGACGGGTTCTGCAGTGATGGCCCAGGAAGAGATCACCCTGCGAATCGATCGGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTGCCAc < 5:250216/149‑1 (MQ=255) gTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCAc > 1:266320/1‑147 (MQ=255) gTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGa < 6:303132/149‑1 (MQ=255) tttGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGc < 8:272843/116‑1 (MQ=255) gCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGAGCACCAGCCGAATCGAACTGGTCCGTGGCCAGTGCAGCGCAACCCTCTGGACGACTGAGCTGTCCCACGAGTAc > 4:61807/1‑149 (MQ=255) tCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCCAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGt > 6:313939/1‑148 (MQ=255) cgcgAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACt > 5:233835/1‑127 (MQ=255) cgcgAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACt < 6:233835/127‑1 (MQ=255) gcgAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTg > 5:190168/1‑147 (MQ=255) aGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACCGACCTGTCCCACGAGTACGTGAAGAt < 1:9212/149‑1 (MQ=255) gCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATc < 5:55680/149‑1 (MQ=255) aaGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAAc < 7:320432/149‑1 (MQ=255) ggcggcCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGc > 3:63129/1‑149 (MQ=255) gAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGgacga > 7:76495/1‑101 (MQ=255) gAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGgacga < 8:76495/101‑1 (MQ=255) gAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCt > 3:58699/1‑149 (MQ=255) aGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTg < 4:63129/149‑1 (MQ=255) taCCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATc < 2:266320/147‑1 (MQ=255) taCCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATc < 6:190168/147‑1 (MQ=255) ccGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTAc < 4:58699/148‑1 (MQ=255) ccGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACt > 6:184736/1‑149 (MQ=255) cGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAAATGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACATGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTaat > 3:140870/1‑146 (MQ=255) aaGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGAt < 8:175429/149‑1 (MQ=255) gggTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAgg > 7:44458/1‑149 (MQ=255) ggCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGACGGCCTCtt > 4:90114/1‑149 (MQ=255) cacggcccagttcgattcggatggtgatctcttcctgggccGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCgg > 3:128909‑M2/42‑148 (MQ=255) GGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGa < 3:187541‑M1/92‑1 (MQ=255) GGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGa > 4:187541‑M1/1‑92 (MQ=255) CCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGcc < 4:351030‑M1/149‑1 (MQ=255) CCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGcc > 4:140870‑M1/1‑149 (MQ=255) CCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGcc < 5:35292‑M1/149‑1 (MQ=255) agttcgattcggatggtgatctcttcctgggccGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTg > 2:173953‑M2/34‑86 (MQ=255) agttcgattcggatggtgatctcttcctgggccGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTg < 1:173953‑M2/53‑1 (MQ=255) gcagagATCACCCTCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAACCCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCCACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCt < 3:61807/147‑1 (MQ=255) gAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCt > 1:345598/1‑149 (MQ=255) agagATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGa < 6:204608/109‑1 (MQ=255) agaTCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCca < 6:35292/149‑1 (MQ=255) tCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTcg < 7:17747/128‑1 (MQ=255) tCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTcg > 8:17747/1‑128 (MQ=255) gAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACTAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTAc < 1:224922/95‑1 (MQ=255) gAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTAc > 2:224922/1‑95 (MQ=255) aCTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCt < 5:313939/147‑1 (MQ=255) tgggccGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAAt > 6:118347‑M2/7‑141 (MQ=255) tgggccGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAAt < 5:118347‑M2/135‑1 (MQ=255) gggccGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCTGCAg > 5:172769‑M2/6‑148 (MQ=255) | CCGGAGCTGGATGTGAGCCTGATCGATGTTTACCTGGACAGCGTTTGCATCGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGATGGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACTGACCTGTCCCACGAGTACGTGAAGATCAACGCCGAGTACCGTACCTGATCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCTGCAG > NC_002947/1535985‑1536272 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |