| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1574147 = | 44 (0.790) | 6 (0.110) | 6/248 | NT | 11.2% | coding (103/393 nt) | pcaC | 4‑carboxymuconolactone decarboxylase |
| ? | NC_002947 | 1574202 = | 53 (0.990) | coding (158/393 nt) | pcaC | 4‑carboxymuconolactone decarboxylase | |||||
GCCGCCGCACGCAGGTGCAGCTTCAGCTCGTCGTTGCGGTTCATGCCAATCAGCATGGCGATGGTGATCAGGCTGCGGGTATGGCGCGGCAGCCCCGGGCGGGTCCAGATGTCACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1574298‑1574147‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGCGGCCAACAATGGCGTGACCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGCG > NC_002947/1574202‑1574348 GCCGCCGCACGCAGGTGCAGCTTCAGCTCGTCGTTGCGGTTCATGCCAATCAGCATGGCGATGGTGATCAGGCTGCGGGTATGGCGCGGCAGCCCCGGGCGGGTCCAGATGTCACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTC > 7:256751/1‑149 GCCGCACGCAGGTGCAGCTTCAGCTCGTCGTTGCGGTTCATGCCAATCAGCATGGCGATGGTGATCAGGCTGCGGGTATGGCGCGGCAGCCCCGGGCGGGTCCAGATGTCACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTCGC > 6:312195/1‑148 CCCGGGCGGGTCCAGATGTCACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTG > 7:83499/1‑149 CGGGCGGGTCCAGATGTCACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCG > 6:321731/1‑149 GGCGGGTCCAGATGTCACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGC > 2:282578/1‑149 GGCGGGTCCAGATGTCACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGC < 8:83499/149‑1 ACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGCGGCCAACAATGGCGT < 1:282578/148‑1 CCTGGAACTCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGCGGCCAACAATGGCGTGACCCGCGACGAGATCAAGGAAGTGC < 5:321731/148‑1 CGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGCGGCCAACAATGGCGTGACCCGCGACGAGATCAAGGAAGTGCTGATGCAGAG > 5:270846/1‑149 GCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGCGGCCAACAATGGCGTGACCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGC < 3:331484/149‑1 CCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGCGGCCAACAATGGCGTGACCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGCG > 1:12044/1‑149 GCCGCCGCACGCAGGTGCAGCTTCAGCTCGTCGTTGCGGTTCATGCCAATCAGCATGGCGATGGTGATCAGGCTGCGGGTATGGCGCGGCAGCCCCGGGCGGGTCCAGATGTCACCCCAGGCGTGGCGGGTGATCATTTCCTGGAACTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1574298‑1574147‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGGCGGCCAACAATGGCGTGACCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGCG > NC_002947/1574202‑1574348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |