New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1574147 =	44 (0.790)	6 (0.110)	6/248	NT	11.2%	coding (103/393 nt)	pcaC	4‑carboxymuconolactone decarboxylase
	?	NC_002947	1574202 =	53 (0.990)					coding (158/393 nt)	pcaC	4‑carboxymuconolactone decarboxylase

GCCGCCGCGTGCTCGATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGG  >  NC_002947/1574000‑1574294                                                                                                                                                    |                                                                                                                                                     gccgccGCGTGCTCGATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATg                                                                                                                                                      >  8:206979/1‑148 (MQ=255) gccgccGCGTGCTCGATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATg                                                                                                                                                      <  7:206979/148‑1 (MQ=255) cgctctgcatcagcacttccttgatctcgtcgcgggtcacgccattgttggccgccgcacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccggg                                                                                                                                                     >  1:12044‑M1/148‑149 (MQ=255)  gctctgcatcagcacttccttgatctcgtcgcgggtcacgccattgttggccgccgcacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccgGGc                                                                                                                                                    <  3:331484‑M1/3‑1 (MQ=255)  ccgccgCGTGCTCGATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGc                                                                                                                                                    >  7:21041/1‑149 (MQ=255)   ctctgcatcagcacttccttgatctcgtcgcgggtcacgccattgttggccgccgcacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccgGGCg                                                                                                                                                   >  5:270846‑M1/146‑149 (MQ=255)   cgccgcGTGCTCGATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCg                                                                                                                                                   <  1:330009/149‑1 (MQ=255)   cgccgcGTGCTCGATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGAACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCg                                                                                                                                                   <  2:314170/149‑1 (MQ=255)             gcacttccttgatctcgtcgcgggtcacgccattgttggccgccgcacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccgGGCGAGTTCCAgg                                                                                                                                          <  5:321731‑M1/13‑1 (MQ=255)               gATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGaaa                                                                                                                                       >  5:312195/1‑149 (MQ=255)               gATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGa                                                                                                                                         >  1:92365/1‑147 (MQ=255)               gATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGa                                                                                                                                         <  2:92365/147‑1 (MQ=255)                     ctgctgGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATc                                                                                                                                  <  3:172114/148‑1 (MQ=255)                         tgGCTCACTGAGGACAACGCCATGGACGAGAAACAACTTTACGACGCTGGAATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCAACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATTGCGAGTTCCAGGAAATGATCACCCg                                                                                                                             >  7:170918/1‑149 (MQ=255)                               aCTGATGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGGATTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTAAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCAc                                                                                                                         <  8:170918/147‑1 (MQ=255)                                cTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGcc                                                                                                                      >  6:19401/1‑149 (MQ=255)                                   aGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCt                                                                                                                     <  3:4569/147‑1 (MQ=255)                                     gACAACGCCATGGACGAGAAACAACG‑TACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGt                                                                                                                >  8:65582/1‑149 (MQ=255)                                       acgccattgttggccgccgcacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccgGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGt                                                                                                                <  1:282578‑M1/39‑1 (MQ=255)                                        aaCGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGaaa                                                                                                                                       <  5:126672/124‑1 (MQ=255)                                        aaCGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGaaa                                                                                                                                       >  6:126672/1‑124 (MQ=255)                                          cGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACa                                                                                                           <  1:81193/149‑1 (MQ=255)                                                      gccgcacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccgGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGAcccgcc                                                                                               <  8:83499‑M1/55‑1 (MQ=255)                                                      gccgcacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccgGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGAcccgcc                                                                                               >  2:282578‑M1/95‑149 (MQ=255)                                                      gaAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGAcccgcc                                                                                               >  2:278361/1‑149 (MQ=255)                                                       aaaCAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGAcccgccc                                                                                              >  6:232629/1‑149 (MQ=255)                                                        cgcacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccgGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGAcccgcccg                                                                                             >  6:321731‑M1/93‑149 (MQ=255)                                                          cacgcaggtgcagcttcagctcgtcgttgcggttcatgccaatcagcatggcgatggtgatcaggctgcgggtatggcgcggcagccccgGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCggg                                                                                           >  7:83499‑M1/91‑149 (MQ=255)                                                           aacGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCgggg                                                                                          >  2:27635/1‑149 (MQ=255)                                                                     cgCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTGCACATCTGGACCCGCCCGGGGCTGCCgcgc                                                                                 <  1:27635/149‑1 (MQ=255)                                                                       cTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCAt                                                                              <  1:278361/149‑1 (MQ=255)                                                                            aTGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCTCACCCTGCACAAGCTCAACCACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGATG‑ACATCTGGACCCGCCCGGAGCTGCCTCGACATACCCg                                                                         >  4:258289/1‑149 (MQ=255)                                                                                aaGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑Ac                                                                                                            >  4:215357/1‑110 (MQ=255)                                                                                aaGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑Ac                                                                                                            <  3:215357/110‑1 (MQ=255)                                                                                 aGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGcc                                                                    >  6:171882/1‑149 (MQ=255)                                                                                       ccgcGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCa                                                              >  4:331484/1‑149 (MQ=255)                                                                                        cgcgCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCAc                                                             >  5:34945/1‑149 (MQ=255)                                                                                         gcgcAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCAcc                                                            <  8:21041/149‑1 (MQ=255)                                                                                                 cTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTg                                                                                                                    <  8:231621/86‑1 (MQ=255)                                                                                                 cTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTg                                                                                                                    >  7:231621/1‑86 (MQ=255)                                                                                                    ggTGATGCGCTCGTGGACCGCAGCCTGGAGAAGCTCAACGTCTTCTATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGc                                                  <  3:258289/148‑1 (MQ=255)                                                                                                    ggTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGc                                                  <  6:34945/148‑1 (MQ=255)                                                                                                    ggTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGc                                                  <  5:232629/148‑1 (MQ=255)                                                                                                            ccACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGc                                          >  1:127395/1‑148 (MQ=255)                                                                                                            ccACGTGGAACGCACCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAAAGATCACCCGCCACGCCTGGGGAG‑ACATCTGGACCCGCCCGGGCCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATAGGc                                          >  7:69430/1‑148 (MQ=255)                                                                                                                  ggACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCCGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAAcc                                   >  1:109040/1‑149 (MQ=255)                                                                                                                      cGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCaa                               <  7:65582/149‑1 (MQ=255)                                                                                                                        cAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAac                              >  8:120164/1‑148 (MQ=255)                                                                                                                                    gCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTTGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAg                  <  7:120164/148‑1 (MQ=255)                                                                                                                                    gCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCAGCGCCATACCCGCAGCCTGATCACCATCGCCAAGCTGATTGGCATGAACCGCACCGACGCGCTGAAGc                 >  8:291476/1‑149 (MQ=255)                                                                                                                                     cTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCt                >  5:190418/1‑149 (MQ=255)                                                                                                                                      tCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGAAACGACGAGCTGAAGCTg               >  3:271027/1‑149 (MQ=255)                                                                                                                                       cAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTg               >  5:118974/1‑148 (MQ=255)                                                                                                                                        aaCGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCa             >  3:64188/1‑149 (MQ=255)                                                                                                                                        aaCGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCa             >  8:256751/1‑149 (MQ=255)                                                                                                                                             cTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCtgc        <  5:171882/149‑1 (MQ=255)                                                                                                                                              ttCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCAc            >  7:86651/1‑144 (MQ=255)                                                                                                                                              ttCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCAc            <  8:86651/144‑1 (MQ=255)                                                                                                                                                   tGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTgcgg  >  8:330711/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GCCGCCGCGTGCTCGATTTCCTGCTGGCTCACTGAGGACAACGCCATGGACGAGAAACAACGTTACGACGCTGGCATGCAAGTGCGCCGCGCAGTGCTGGGTGATGCCCACGTGGACCGCAGCCTGGAGAAGCTCAACGACTTCAATGGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTG‑ACATCTGGACCCGCCCGGGGCTGCCGCGCCATACCCGCAGCCTGATCACCATCGCCATGCTGATTGGCATGAACCGCAACGACGAGCTGAAGCTGCACCTGCGTGCGG  >  NC_002947/1574000‑1574294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.