| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1616849 | 52 (0.940) | 3 (0.060) | 3/244 | NT | 5.6% | coding (410/1515 nt) | PP_1416 | tricarboxylate transport protein TctA |
| ? | NC_002947 | = 1616879 | 52 (0.990) | coding (380/1515 nt) | PP_1416 | tricarboxylate transport protein TctA | |||||
CGTCGATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1616697‑1616849‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaCCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCCGCTC < NC_002947/1616879‑1616733 CGTCGATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTC < 1:142926/149‑1 GATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGC > 2:119472/1‑147 ATGCCGACCGCCGAGAGGAACAGGCCGATGCGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCCCCGGCCATGCCCCCCACCGCGACGATGGCGAACACCATCAGCACAAAGTACTCAGCCGGGCCGAAGGCGAAGGCCAATTTCGCaag > 6:251546/1‑146 ATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTC > 1:128826/1‑144 ATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTC < 2:128826/144‑1 TGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGG < 1:325009/149‑1 GCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCG < 7:14724/117‑1 GCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCG > 8:14724/1‑117 TCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCC > 7:323178/1‑149 CCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCAT < 5:35664/94‑1 CCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCAT > 6:35664/1‑94 CACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCCGCTC < 7:271949/149‑1 CGTCGATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1616697‑1616849‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaCCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCCGCTC < NC_002947/1616879‑1616733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |