New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1647433 =	55 (0.990)	6 (0.110)	4/244	NT	11.3%	coding (1289/1335 nt)	oprB‑II	carbohydrate‑selective porin
	?	NC_002947	1647473 =	42 (0.800)					coding (1249/1335 nt)	oprB‑II	carbohydrate‑selective porin

GCCGGCCTCTATGACTACGACAACCCGGGCTTCCTGCCAGTGCAGGACACCGAGTACAGCGCCGAGCTGTATTACGGCATTCACTTGGCCGACTGGCTCACGGTACGCCCCAACCTGCAGTACATCCGCCACCCGGGCGGGGTGTCGCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1647584‑1647433 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggtTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGA  >  NC_002947/1647473‑1647615                                                                                                                                                                                                                                                                                                         GCCGGCCTCTATGACTACGACAACCCGGGCTTCCTGCCAGTGCAGGACACCGAGTACAGCGCCGAGCTGTATTACGGCATTCACTTCGCCGACTGGCTCACGGTACGCCCCAACCTACAGTACATCCGCCACCCGGGCGGGGTGTCGCA                                                                                                                                                    <  6:90035/149‑1   CGGCCTCTATGACTACGACAACCCGGGCTTCCTGCCAGTGCAGGACACCGAGTACAGCGCCGAGCTGTATTACGGCATTCACTTGGCCGACTGGCTCACGGTACGCCCCAACCTGCAGTACATCCGCCACCCGGGCGGGGTGTCGCAGG                                                                                                                                                  >  2:84960/1‑149                                                                                                             CCCAACCTGCAGTACATCCGCCACCCGGGCGGGGTGTCGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATA                                          >  2:211908/1‑147                                                                                                             CCCAACCTGCAGTACATCCGCCACCCGGGCGGGGTGTCGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATA                                          >  2:217169/1‑147                                                                                                                 ACCTGCAGTACATCCGCCACCCGGGCGGGGTGTCGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTC                                                   >  3:30429/1‑134                                                                                                                 ACCTGCAGTACATCCGCCACCCGGGCGGGGTGTCGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTC                                                   <  4:30429/134‑1                                                                                                                      CAGTACATCCGCCACCCGGGCGGGGTGTCGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCG                                <  1:211908/148‑1                                                                                                                      CAGTACATCCGCCACCCGGGCGGGGTGTCGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCG                                <  1:217169/148‑1                                                                                                                                                    CAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGA                                        >  3:31770/1‑110                                                                                                                                                    CAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGA                                        <  4:31770/110‑1                                                                                                                                                    CAGCTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGA  >  5:167213/1‑148                                                                                                                                                                                                                                                                                                         GCCGGCCTCTATGACTACGACAACCCGGGCTTCCTGCCAGTGCAGGACACCGAGTACAGCGCCGAGCTGTATTACGGCATTCACTTGGCCGACTGGCTCACGGTACGCCCCAACCTGCAGTACATCCGCCACCCGGGCGGGGTGTCGCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1647584‑1647433 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggtTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGA  >  NC_002947/1647473‑1647615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.