| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1667298 = | 52 (0.940) | 4 (0.080) | 4/246 | NT | 7.6% | coding (300/1377 nt) | ffh | signal recognition particle GTPase subunit |
| ? | NC_002947 | 1667354 = | 47 (0.880) | coding (356/1377 nt) | ffh | signal recognition particle GTPase subunit | |||||
TTTCCAACTGCTTGATCGCCGCCGGACGATAAACGTCGGCAGACACCACCATCACGCTCTTTTTCTTGCGCTCTTTAAGAAAGCGCGCCAGCTTGCCGGCGGTGGTGGTCTTACCGGCGCCTTGCAGGCCCGCCATCAGCACGACGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1667446‑1667298‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAA‑GCAGTTGGAAACACTGGCCAACGATATCGGCGTCACCTTCTTCCCGTCCGATATCAGCCAGAA > NC_002947/1667354‑1667498 TTTCCAACTGCTTGATCGCCGCCGGACGATAAACGTCGGCAGACACCACCATCACGCTCTTTTTCTTGCGCTCTTTAAGAAAGCGCGCCAGCTTGCCGGCGGTGGTGGTCTTACCGGCGCCTTGCAGGCCCGCCATCAGCACGACGG > 7:109905/1‑147 TTGCCGGCGGTGGTGGTCTTACCGGCGCCTTGCAGGCCCGCCATCAGCACGACGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAA‑GCAGTT < 7:81446/145‑1 TTGCCGGCGGTGGTGGTCTTACCGGCGCCTTGCAGGCCCGCCATCAGCACGACGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAA‑GCAGTT > 8:81446/1‑145 CCGGCGGTGGTGGTCTTACCGGCGCCTTGCAGGCCCGCCATCAGCACGACGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGAC < 1:346943/113‑1 CCGGCGGTGGTGGTCTTACCGGCGCCTTGCAGGCCCGCCATCAGCACGACGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGAC > 2:346943/1‑113 GCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAAGGGAGTTGGAAACACTGGCCAACGATATCGGCGTCACCTTCTTCCCGTCCGATATCAGCCAGAA < 1:102856/149‑1 TTTCCAACTGCTTGATCGCCGCCGGACGATAAACGTCGGCAGACACCACCATCACGCTCTTTTTCTTGCGCTCTTTAAGAAAGCGCGCCAGCTTGCCGGCGGTGGTGGTCTTACCGGCGCCTTGCAGGCCCGCCATCAGCACGACGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1667446‑1667298‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAA‑GCAGTTGGAAACACTGGCCAACGATATCGGCGTCACCTTCTTCCCGTCCGATATCAGCCAGAA > NC_002947/1667354‑1667498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |