New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1667298 = | 52 (0.940) | 4 (0.080) | 4/246 | NT | 7.6% | coding (300/1377 nt) | ffh | signal recognition particle GTPase subunit |
? | NC_002947 | 1667354 = | 47 (0.880) | coding (356/1377 nt) | ffh | signal recognition particle GTPase subunit |
GTCAACAGCGTCAAGGATCGTGCGGTCGGGACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAAGCAGTTGGAA > NC_002947/1667152‑1667445 | ttctggctgatatcggacgggaagaaggtgacgccgatatcgttggccagtgtttccaactcccttgatcgccgccggacgataaacgtcggcagacaccaccatcacgctctttttcttgcgctctttaagaaagcgcgccagctTGc < 1:102856‑M1/3‑1 (MQ=255) gTCAACAGCGTCAAGGATCGTGCGGTCGGGACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGc < 6:92966/149‑1 (MQ=255) aCAGCGTCAAGGATCGTGCGGTCGGGACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCcgtc > 6:190068/1‑149 (MQ=255) aaGGTTCGTGCCATCGGGACCGCGGTGGCGCGCAGCCTGACTCCGGG‑CAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGAt < 1:333996/148‑1 (MQ=255) aaGGATCGTGCGGTCGGGACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGAt > 6:78163/1‑149 (MQ=255) gATCGTGCGGTCGGGACCGAGGTGTCGCGCTGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGc > 1:32112/1‑149 (MQ=255) gTGCGGTCGGGACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCggg < 2:32112/148‑1 (MQ=255) tGCGGTCGGGACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGCGCTGGAAAGCATGATGGGCGAGGCCAACGCAGCCCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGcc > 8:191727/1‑149 (MQ=255) tCGGGACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCaa < 8:168701/149‑1 (MQ=255) gggACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAg < 6:158978/148‑1 (MQ=255) ccGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGcc > 7:141442/1‑149 (MQ=255) gtgtCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTaa < 5:78163/149‑1 (MQ=255) cgcgCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGTGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGacc < 2:92603/149‑1 (MQ=255) tGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGgcgc > 6:99419/1‑130 (MQ=255) tGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGgcgc < 5:99419/130‑1 (MQ=255) tGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCAccgcc > 1:152697/1‑149 (MQ=255) cTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCTCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCGAGgcgc < 6:335884/127‑1 (MQ=255) cTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCGAGgcgc > 5:335884/1‑127 (MQ=255) tCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGc > 1:101041/1‑148 (MQ=255) cGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAg > 2:85563/1‑149 (MQ=255) gggCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGc < 5:190068/149‑1 (MQ=255) gCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTg < 8:141442/149‑1 (MQ=255) aactgcttgatcgccgccggacgataaacgtcggcagacaccaccatcacgctctttttcttgcgctctttaagaaagcgcgccagctTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCaa > 8:81446‑M1/89‑145 (MQ=255) aactgcttgatcgccgccggacgataaacgtcggcagacaccaccatcacgctctttttcttgcgctctttaagaaagcgcgccagctTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCaa < 7:81446‑M1/57‑1 (MQ=255) ccAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCt > 6:36725/1‑147 (MQ=255) ccAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCt < 5:36725/147‑1 (MQ=255) gTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTc < 3:79112/148‑1 (MQ=255) tGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCtt < 2:152697/149‑1 (MQ=255) gAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCtt > 6:275614/1‑148 (MQ=255) gAAGATCGTACAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCtt > 5:159187/1‑148 (MQ=255) tCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAgcgc < 1:85563/149‑1 (MQ=255) aGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAgcgc > 3:163486/1‑146 (MQ=255) ggCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAg > 2:102402/1‑148 (MQ=255) gCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGa > 5:244112/1‑148 (MQ=255) gtcggcagacaccaccatcacgctctttttcttgcgctctttaagaaagcgcgccagctTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCgg < 1:346943‑M1/54‑1 (MQ=255) gtcggcagacaccaccatcacgctctttttcttgcgctctttaagaaagcgcgccagctTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCgg > 2:346943‑M1/60‑113 (MQ=255) gAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGc > 6:157204/1‑147 (MQ=255) gAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGc < 5:157204/147‑1 (MQ=255) gAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGt > 8:181781/1‑149 (MQ=255) gATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCaa < 3:132795/129‑1 (MQ=255) gATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCaa > 4:132795/1‑129 (MQ=255) cgcgGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTg < 6:159187/149‑1 (MQ=255) cAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAagag < 8:172096/126‑1 (MQ=255) cAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAagag > 7:172096/1‑126 (MQ=255) cAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACg > 3:66187/1‑149 (MQ=255) aaCGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCTGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGt < 7:191727/149‑1 (MQ=255) caaGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGAAGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTa > 2:102856/2‑149 (MQ=255) aGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATc < 5:275614/149‑1 (MQ=255) tCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCcg > 7:130628/1‑149 (MQ=255) cGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCcgg > 1:77728/1‑149 (MQ=255) cACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCcggcg > 1:211570/1‑149 (MQ=255) aCTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCcggcgg > 8:109905/1‑149 (MQ=255) aaCGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATggtggt > 6:254667/1‑119 (MQ=255) aaCGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATggtggt < 5:254667/119‑1 (MQ=255) aaCGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGAt > 5:198379/1‑149 (MQ=255) aCGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATc < 6:198379/149‑1 (MQ=255) gccgccCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTcc < 7:262478/137‑1 (MQ=255) gccgccCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTcc > 8:262478/1‑137 (MQ=255) cgccTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAAGCAGTTg < 4:163486/149‑1 (MQ=255) cTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAAGCAGTTGGaa < 2:77728/149‑1 (MQ=255) | GTCAACAGCGTCAAGGATCGTGCGGTCGGGACCGAGGTGTCGCGCAGCCTGACTCCGGGCCAGGCCTTCGTGAAGATCGTCCAGGCCGAGCTGGAAAGCCTGATGGGCGCGGCCAACGAAGACCTCGCACTGAACGCCGCCCCGCCTGCCGTCGTGCTGATGGCGGGCCTGCAAGGCGCCGGTAAGACCACCACCGCCGGCAAGCTGGCGCGCTTTCTTAAAGAGCGCAAGAAAAAGAGCGTGATGGTGGTGTCTGCCGACGTTTATCGTCCGGCGGCGATCAAGCAGTTGGAA > NC_002947/1667152‑1667445 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |