| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1902818 | 55 (0.990) | 4 (0.080) | 4/244 | NT | 7.2% | coding (3369/4026 nt) | PP_1703 | assimilatory nitrate reductase/sulfite reductase |
| ? | NC_002947 | = 1902874 | 50 (0.950) | coding (3425/4026 nt) | PP_1703 | assimilatory nitrate reductase/sulfite reductase | |||||
ACTGCGCAACAACTGCAGGCATTTGCCAGCAACGCGCCTGACCTGCAGCGCTTGCTGCAGCCTGAATGCAAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1902666‑1902818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcGGGCTGGAACTGATCGAATAGAGCCGCGGCTGCAATGGTTTGAGCAGTTCCAGCCAGCTGGCCAGCGGCAACTGCTGGGGGAAGGCGCGCAGCACATCGACCAACTGCCGGCCCCACAGCCAATCTTGCAGCTCGGCCTTGCATTCAG < NC_002947/1902874‑1902727 ACTGCGCAACAACTGCAGGCATTTGCCAGCAACGCGCCTGACCTGCAGCGCTTGCTGCAGCCTGAATGCAAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGC > 3:311905/1‑149ACTGCGCAACAACTGCAGGCATTTGCCAGCAACGCGCCTGACCTGCAGCGCTTGCTGCAGCCTGAATGCAAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGC < 4:257673/149‑1 AACTGCAGGCATTTGCCAGCAACGCGCCTGACCTGCAGCGCTTGCTGCAGCCTGAATGCAAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGC > 5:20847/1‑143 AACTGCAGGCATTTGCCAGCAACGCGCCTGACCTGCAGCGCTTGCTGCAGCCTGAATGCAAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGC > 5:26151/1‑143 AACTGCAGGCATTTGCCAGCAACGCGCCTGACCTGCAGCGCTTGCTGCAGCCTGAATGCAAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGC < 6:20847/143‑1 AACTGCAGGCATTTGCCAGCAACGCGCCTGACCTGCAGCGCTTGCTGCAGCCTGAATGCAAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGC < 6:26151/143‑1 AAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGCGGGCTGGAACTGATCGAATAGAGCCGCGGCTGCAATGGTTTGAGCAGTTCCAGCCAGCTGGCCAG < 7:134186/149‑1 AAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGCGGGCTGGAACTGATCGAATAGAGCCGCGGCTGCAATGGTTTGAGCAGTTCCAGCCAGCTGGCCAG > 8:134186/1‑149 CAAGATTGGCTGTGGGGCCCGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGCGGGCTGGAACTGATCGAATAGAGCCGCGGCTGCAATGGTTTGAGCAGTTCCAGCCA < 1:208595/128‑1 CAAGATTGGCTGTGGGGCCCGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGCGGGCTGGAACTGATCGAATAGAGCCGCGGCTGCAATGGTTTGAGCAGTTCCAGCCA > 2:208595/1‑128 GCCAGCGGGCTGGAACTGATCGAATAGAGCCGCGGCTGCAATGGTTTGAGCAGTTCCAGCCAGCTGGCCAGCGGCAACTGCTGGGGGAAGGCGCGCAGCACATCGACCAACTGCCGGCCCCACAGCCAATCTTGCAGCTCGGCCTT < 3:152265/146‑1 GCCAGCGGGCTGGAACTGATCGAATAGAGCCGCGGCTGCAATGGTTTGAGCAGTTCCAGCCAGCTGGCCAGCGGCAACTGCTGGGGGAAGGCGCGCAGCACATCGACCAACTGCCGGCCCCACAGCCAATCTTGCAGCTCGGCCTT > 4:152265/1‑146 CGGGCTGGAACTGATCGAATCGTGCCGCGGCTGCAATGGTTTGAGCAGTTCCTGCCAGCTGGCCAGCGGCAACTGCTGGGGGACGCCGCGCAGCACATCGACCAACTGCCGGCCCCACAGCCAATCTTGCAGCTCGGCCTTGCATTCAG < 7:55307/149‑1 ACTGCGCAACAACTGCAGGCATTTGCCAGCAACGCGCCTGACCTGCAGCGCTTGCTGCAGCCTGAATGCAAGGCCGAGCTGCAAGATTGGCTGTGGGGCCGGCAGTTGGTCGATGTGCTGCGCGCCTTCCCCCAGCAGTTGCCGCTGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1902666‑1902818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcGGGCTGGAACTGATCGAATAGAGCCGCGGCTGCAATGGTTTGAGCAGTTCCAGCCAGCTGGCCAGCGGCAACTGCTGGGGGAAGGCGCGCAGCACATCGACCAACTGCCGGCCCCACAGCCAATCTTGCAGCTCGGCCTTGCATTCAG < NC_002947/1902874‑1902727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |