| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2058506 = | 48 (0.870) | 5 (0.100) | 3/242 | NT | 9.3% | coding (56/525 nt) | PP_1834 | hypothetical protein |
| ? | NC_002947 | 2058555 = | 52 (0.990) | coding (105/525 nt) | PP_1834 | hypothetical protein | |||||
CAGCAAGCGCACCGCCTCGTGGTGACCGTGGTAGCTGGCCAGCATCAGCAGGGTATCGCCCTTGTGGTTACGCAGGTTGGCCGGCAGGCCGCTGGCAAGCAGGCGCCCGAGCATGTCGGCGTCGCCCTGGCGGGCACGTTCGAACACCTGCTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2058660‑2058506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctcggGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGGCGGTGCGCTTGCTGCTGGCGCAAGGTGCCGACCCGCTGATTGCCAACGACAACGGC > NC_002947/2058555‑2058702 CAGCAAGCGCACCGCCTCGT‑GTGACCGTGGTAGCTGGCCAGCATCAGCAGGGTATCGCCCTTGTGGTTACGCAGGTTGGCCGGCAGGCCGCTGGCAAGCAGGCGCCCGAGCATGTCGGCGTCGCCCTGGCGGGCACGTTCGAACACCTG < 5:107503/149‑1 GCAAGCGCACCGCCTCGTGGTGACCGTGGTAGCTGGCCAGCATCAGCAGGGTATCGCCCTTGTGGTTACGCAGGTTGGCCGGCAGGCCGCTGGCAAGCAGGCGCCCGAGCATGTCGGCGTCGCCCTGGCGGGCACGTTCGAACACCTGC > 5:51815/1‑149 GCCCGAGCATGTCGGCGTCGCCCTGGCGGGCAGGTTCGAACACCTGCTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCAGAAGGGCGAGACCCTGCTGATGCTGGCCTGCTACCACGGTCACCACGAGGCGGTGC > 3:230170/1‑149 CCGAGCATGTCGGCGTCGCCCTGGCGGGCACGTTCGAACACCTGCTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGGCGGTGCGC > 3:59382/1‑149 CCGAGCATGTCGGCGTCGCCCTGGCGGGCACGTTCGAACACCTGCTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGG < 7:250931/141‑1 CCGAGCATGTCGGCGTCGCCCTGGCGGGCACGTTCGAACACCTGCTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGG > 8:250931/1‑141 CCGAGCATGTCGGCGTCGCCCTGGCGGGCACGTTCGAACACCTGCTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCGGCTGATGCTGGCCAGGTACCACGGTCACCACGAGGCGGTGCGC > 2:196706/1‑149 CTGCTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGGCGGTGCGCTTGCTGCTGGCGCAAGGTGCCGACCCGCTGATTGCCAACGA < 4:59382/149‑1 GCTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGGCGGTGC > 3:272496/1‑104 GCTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGGCGGTGC < 4:272496/104‑1 CTCGGGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAG < 2:294643/77‑1 GGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGGCGGTGCGCTTGCTGCTGGCGCAAGGTGCCGACCCGCTGATTGCCAACGACAACGGC < 2:206239/149‑1 CAGCAAGCGCACCGCCTCGTGGTGACCGTGGTAGCTGGCCAGCATCAGCAGGGTATCGCCCTTGTGGTTACGCAGGTTGGCCGGCAGGCCGCTGGCAAGCAGGCGCCCGAGCATGTCGGCGTCGCCCTGGCGGGCACGTTCGAACACCTGCTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2058660‑2058506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctcggGCGCCTGCTTGCCAGCGGCCTGCCGGCCAACCTGCGTAACCACAAGGGCGATACCCTGCTGATGCTGGCCAGCTACCACGGTCACCACGAGGCGGTGCGCTTGCTGCTGGCGCAAGGTGCCGACCCGCTGATTGCCAACGACAACGGC > NC_002947/2058555‑2058702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |