| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2341836 | 111 (2.000) | 6 (0.110) | 6/248 | NT | 5.0% | coding (1056/1305 nt) | yraO | transporter YraO |
| ? | NC_002947 | = 2341857 | 119 (2.220) | coding (1077/1305 nt) | yraO | transporter YraO | |||||
GTATTTTCTCGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2341685‑2341836‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcATTGGCCAGGATCGGCACAACGCCGAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCAT < NC_002947/2341857‑2341712 GTATTTTCTCGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTC > 8:175111/1‑149GTATTTTCTCGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTC < 5:40617/149‑1 TATTTTCTCGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCG > 1:40400/1‑149 TATTTTCTCGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCG < 7:321501/149‑1 TATTTTCTCGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCG < 2:67785/149‑1 CGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGC < 4:155008/143‑1 CGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGC > 3:155008/1‑143 CCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGCATTGGCCAGGATCGGCACAACGCC > 7:163293/1‑139 CCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGCATTGGCCAGGATCGGCACAACGCC < 8:163293/139‑1 CTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGCATTGGCCAGGATCGGCACAACGCCGAAGTA < 2:85496/130‑1 CTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGCATTGGCCAGGATCGGCACAACGCCGAAGTA > 1:85496/1‑130 GCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGCATTGGCCAGGATCGGCACAACGC < 7:322213/70‑1 GCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGCATTGGCCAGGATCGGCACAACGC > 8:322213/1‑70 CGGCATTGGCCAGGATCGGCACAACGCCGAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCC < 1:16609/116‑1 CGGCATTGGCCAGGATCGGCACAACGCCGAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCC > 2:16609/1‑116 GGCATTGGCCAGGATCGGCACAACGCCGAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCAT < 1:46349/149‑1 GGCATTGGCCAGGATCGGCACAACGCCGAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCAT < 8:79406/149‑1 GTATTTTCTCGGGTACCAAGATGGTCGATGCATTGGCCCAGACGCTGGTGGACTGGATTCCGGAAGCGTGGAGCCACTGGTTCCCGCTGGTGGTGGCGCTGACCAGCATGCCGCTGACCTTCGTGCTGTCCAACGACGCGTACTACTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2341685‑2341836‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcATTGGCCAGGATCGGCACAACGCCGAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCAT < NC_002947/2341857‑2341712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |