| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2505864 = | 107 (1.930) | 8 (0.160) | 8/238 | NT | 7.5% | coding (464/1107 nt) | PP_2199 | hypothetical protein |
| ? | NC_002947 | 2505904 = | 97 (1.890) | coding (504/1107 nt) | PP_2199 | hypothetical protein | |||||
AACTGGCTGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCGGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2506020‑2505864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccatcgcCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCCCGGAA > NC_002947/2505904‑2506051 AACTGGCTGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCGGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAA < 3:216136/149‑1AACTGGCTGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCGGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTAGCAGGAACCGCTCGCGGTTGAA < 1:319573/149‑1 GCTGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCTGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCA < 5:107232/148‑1 GCTGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCGGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCAT > 4:99022/1‑149 CTGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCGGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATC > 7:52149/1‑149 TGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCGGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCG > 4:152036/1‑149 TGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCGGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCG > 3:75465/1‑149 CGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCC < 4:174626/105‑1 CGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCC > 3:174626/1‑105 GGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGC > 8:243815/1‑149 CGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATAGGGTAGCCGAGGC < 7:191985/138‑1 CGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATAGGGTAGCCGAGGC > 8:191985/1‑138 ATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGG > 2:211997/1‑138 ATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGG < 1:211997/138‑1 GCAGGAACCGCTCGCGGTTGAAGCCATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTG < 7:243815/148‑1 CATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCC > 1:347221/1‑149 ATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCCC > 3:324276/1‑149 ATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCCC < 2:230732/149‑1 ATCGCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCCC < 6:97630/149‑1 GCCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCCCGG > 6:302193/1‑148 CCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCCCGGAA < 7:145311/149‑1 CCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCCCGGAA < 1:246566/149‑1 AACTGGCTGGCCTGCCCCGCCTCGGCTACCCAATAGCGCTGCCGCGCCTCACCGGGGTGCAGGCGGTGATCCTGCTCGCCTGCTACCGGCAATACCTGCATGTGACGACCAATGGCGGCGATGGCTGGCAGGAACCGCTCGCGGTTGAAGCCATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2506020‑2505864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccatcgcCGCCATTGGTCGTCACATGCAGGTATTGCCGGTAGCAGGCGAGCAGGATCACCGCCTGCACCCCGGTGAGGCGCGGCAGCGCTATTGGGTAGCCGAGGCGGGGCAGGCCAGCCAGTTGGGCGAGGTGTTTCGCCAGCTCAGCCCGGAA > NC_002947/2505904‑2506051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |