| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2671446 = | 62 (1.120) | 3 (0.060) | 3/242 | NT | 5.5% | coding (872/2610 nt) | acnB | aconitate hydratase B |
| ? | NC_002947 | 2671516 = | 44 (0.840) | coding (802/2610 nt) | acnB | aconitate hydratase B | |||||
ACAAGCGCGCCGGTGGCTTCTGCTTCGGCACCAAGATCGCCCCGATCTTCTACAACACCATGGAAGACGCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2671521‑2671446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgcGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGG > NC_002947/2671516‑2671587 ACAAGCGCGCCGGTGGCTTCTGCTTCGGCACCAAGATCGCCCCGATCTTCTACAACACCATGGAAGACGCCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGG > 4:78359/1‑148 GCCGGTGGCTTCTGCTTCGGCACCAAGATCGCCCCGATCTTCTACAACACCATGGAAGACGCCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGA < 5:267345/104‑1 GCCGGTGGCTTCTGCTTCGGCACCAAGATCGCCCCGATCTTCTACAACACCATGGAAGACGCCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGA > 6:267345/1‑104 ACAAGCGCGCCGGTGGCTTCTGCTTCGGCACCAAGATCGCCCCGATCTTCTACAACACCATGGAAGACGCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2671521‑2671446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgcGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGG > NC_002947/2671516‑2671587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |