New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2671446 =	62 (1.120)	3 (0.060)	3/242	NT	5.5%	coding (872/2610 nt)	acnB	aconitate hydratase B
	?	NC_002947	2671516 =	44 (0.840)					coding (802/2610 nt)	acnB	aconitate hydratase B

TCACCTTTGTATGGGTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTGGCCTTGACGGCTTCGATCTGGGCCAGCGGG  >  NC_002947/2671374‑2671664                                                                                                                                                |                                                                                                                                                     cctcgcgtaaatccgctaccaactcggtactgtggttcttcggcgacgacatcccttacgtgccgaacaagcGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGt                                                                                                                                                 >  4:78359‑M1/73‑148 (MQ=255)  cACCTTTGTATGGGTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGtt                                                                                                                                                <  4:22943/148‑1 (MQ=255)   aagtttGTATGGGTAAACGTCTATGACGTCGCACATGCGCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTc                                                                                                                                               <  4:184326/145‑1 (MQ=255)   aCCTTTGTATGGGTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCg                                                                                                                                              >  7:196732/1‑149 (MQ=255)   aCCTTTGTATGGGTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCg                                                                                                                                              >  4:114016/1‑149 (MQ=255)   aCCTTTGTATGGGTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCg                                                                                                                                              <  3:288543/149‑1 (MQ=255)              ggTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAgg                                                                                                                                    <  6:309127/148‑1 (MQ=255)               gTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCgg                                                                                                                                             <  1:217276/138‑1 (MQ=255)               gTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCgg                                                                                                                                             >  2:217276/1‑138 (MQ=255)                tAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGAt                                                                                                                                 <  7:131894/149‑1 (MQ=255)                     gTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGTATgtcgt                                                                                                                            >  8:316001/1‑149 (MQ=255)                       cGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAGTTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAgg                                                                                                                                    >  6:208686/1‑139 (MQ=255)                       cGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGACTTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAgg                                                                                                                                    <  5:208686/139‑1 (MQ=255)                           gACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCg                                                                                                                       >  3:323542/1‑148 (MQ=255)                              gTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAACGCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCga                                                                                                                      <  1:255101/147‑1 (MQ=255)                              gTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCga                                                                                                                      >  2:255101/1‑146 (MQ=255)                                 gCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAAcc                                                                                                                <  4:323542/149‑1 (MQ=255)                                 gCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAAc                                                                                                                 >  8:238948/1‑148 (MQ=255)                                       gCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTa                                                                                                          >  1:354187/1‑149 (MQ=255)                                         ccAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTAcc                                                                                                        >  7:118950/1‑149 (MQ=255)                                         ccAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTAcc                                                                                                        >  5:53116/1‑149 (MQ=255)                                         ccAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGAGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTAcc                                                                                                        >  1:269340/1‑149 (MQ=255)                                           aGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGa                                                                                                      <  8:196732/149‑1 (MQ=255)                                            ggTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAg                                                                                                     >  2:332156/1‑149 (MQ=255)                                                ggTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTg                                                                                                  <  3:114016/148‑1 (MQ=255)                                                ggTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTg                                                                                                  <  7:494/148‑1 (MQ=255)                                                   gCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTAcc                                                                                                        <  8:7392/139‑1 (MQ=255)                                                   gCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTAcc                                                                                                        >  7:7392/1‑139 (MQ=255)                                                    cAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGc                                                                                             <  4:150852/149‑1 (MQ=255)                                                           aTTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGAttt                                                                                       <  2:354187/148‑1 (MQ=255)                                                            ttCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACAGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTAc                                                                                     >  3:258329/1‑149 (MQ=255)                                                               gATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTAcgc                                                                                   >  1:38222/1‑148 (MQ=255)                                                                aTCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGa                                                                                 <  2:269340/149‑1 (MQ=255)                                                                   ggCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAgg                                                                               >  5:233878/1‑148 (MQ=255)                                                                    acaagcgcgccggtggcttctgcttcggcaccaagatcgccccgatcttctacaacaccatggaagacgccggcgcGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAgg                                                                               >  4:78359‑M2/77‑148 (MQ=255)                                                                            gccggtggcttctgcttcggcaccaagatcgccccgatcttctacaacaccatggaagacgccggcgcGCTTGTTCGGCACGTAAGGGATGTCGTCGCCgaaga                                                                                                                   >  6:267345‑M2/69‑104 (MQ=255)                                                                            gccggtggcttctgcttcggcaccaagatcgccccgatcttctacaacaccatggaagacgccggcgcGCTTGTTCGGCACGTAAGGGATGTCGTCGCCgaaga                                                                                                                   <  5:267345‑M2/36‑1 (MQ=255)                                                                                  tCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCAc                                                               <  6:233878/149‑1 (MQ=255)                                                                                     tCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTc                                                            >  8:279256/1‑149 (MQ=255)                                                                                                 tAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAgg                                                 >  3:101755/1‑148 (MQ=255)                                                                                                 tAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGc                                                <  7:316001/149‑1 (MQ=255)                                                                                                   gaagaTCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCaa                                              >  7:279734/1‑149 (MQ=255)                                                                                                           gggCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAg                                      >  6:332330/1‑149 (MQ=255)                                                                                                                    tGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGa                                                                   >  4:144018/1‑111 (MQ=255)                                                                                                                    tGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGa                                                                   <  3:144018/111‑1 (MQ=255)                                                                                                                     ggTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTGGcc                             <  1:332156/148‑1 (MQ=255)                                                                                                                          cGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTGGCCTTGACg                       >  7:325363/1‑149 (MQ=255)                                                                                                                               cAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTGGCCTTGACGGCTTc                  >  2:48783/1‑149 (MQ=255)                                                                                                                                   a‑GCGACCGGCGCGGTTGTTCGGCACGTATGGGATGTCGTCGCCGAAGAACCACAGTAACGAGTTGGTAGCGGATTTACGCGAGGAACCGTTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTGGCCTTGACGGATTCGATc              <  4:258329/149‑1 (MQ=255)                                                                                                                                      ccACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTg                                <  7:244759/129‑1 (MQ=255)                                                                                                                                      ccACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTg                                >  8:244759/1‑129 (MQ=255)                                                                                                                                      ccACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTGGCCTTGACGGCTTCGATCTg            >  2:71529/1‑149 (MQ=255)                                                                                                                                        aCCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTT‑GCCTTGACGGCTTCGATCTGGGc         >  4:270675/1‑149 (MQ=255)                                                                                                                                                gcTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTGGCCTTGACGGCTTCGATCTGGGCCAGCggg  <  8:118950/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                     TCACCTTTGTATGGGTAAACGTCGATGACGTCGCCCATGCCCAGGTTGGTGCAGTCGAATTCGATCGGCAGGGCGCCGGCGTCTTCCATGGTGTTGTAGAAGATCGGGGCGATCTTGGTGCCGAAGCAGAA‑GCCACCGGCGCGCTTGTTCGGCACGTAAGGGATGTCGTCGCCGAAGAACCACAGTACCGAGTTGGTAGCGGATTTACGCGAGGAACCGGTACCGACCACGTCGCCGACATAGGCAACCGGGAAGCCCTTGGCCTTGACGGCTTCGATCTGGGCCAGCGGG  >  NC_002947/2671374‑2671664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.