New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2674214 =	43 (0.780)	3 (0.060)	3/242	NT	7.0%	coding (197/732 nt)	PP_2343	hypothetical protein
	?	NC_002947	2674244 =	39 (0.750)					coding (227/732 nt)	PP_2343	hypothetical protein

AAAAGACTGCCGCTGCTTGTACACCAGATCCAGGGTTCTCTCCACAAACGTGGTTACCCCACGCTGGAAAAGGCTGGAATTTTTCCCGTTGTAGTCGGGAAAATACTCCCTGAAATCGTCAGGATCGATACGTAGCGCACTAGATCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2674362‑2674214 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcctgACGATTTCAGGGAGTATTTTCCCGACTACAACGGGAAAAATTCCAGCCTTTTCCAGCGTGGGGTAACCACGTTTGTGGAGAGAACCCTGGATCTGGTGTACAAGCAGCGGCAGTCTTTTCTCTTGGATGGCACCCTCGCCAACCTT  >  NC_002947/2674244‑2674389                                                                                                                                                                                                                                                                                                         AAAAGACTGCCGCTGCTTGTACACCAGATCCAGGGTTCTCTCCACAAACGTGGTTACCCCACGCTGGAAAAGGCTGGAATTTTTCCCGTTGTAGTCGGGAAAATACTCCCTGAAATCGTCAGGATCGATACGTAGCGCACTAGATCCTG                                                                                                                                                    >  4:262497/1‑149                                     TCTCTCCACAAACGTGGTTACACCACGCTGGAAAAGGCTGGAATTTTTCCCGTTGTAGTCGGGAAAATACTCCCTGAAATCGTCAGGATCGATACGTAGCGCACTAGATC                                                                                                                                                       >  6:352526/1‑110                                                                                                               TGAAATCGTCAGGATCGATACGTAGCGCACTAGATCCTGACGATTTCAGGGAGTATTTTCCCGACTACAACGGGAAAAATTCCAGCCTTTTCCAGCGTGGGGTAACCACGTTTGTGGAGAGAACCCTGGATCTGGTGTACAAGCAGCGG                                      >  3:333292/1‑149                                                                                                                           GATCGATACGTAGCGCACTAGATCCTGACGATTTCAGGGAGTATTTTCCCGA                                                                                                                           >  5:217842/1‑52                                                                                                                           GATCGATACGTAGCGCACTAGATCCTGACGATTTCAGGGAGTATTTTCCCGA                                                                                                                           <  6:217842/52‑1                                                                                                                                                ATCCTGACGATTTCAGGGAGTATTTTCCCGACTACAACGGGAAAAATTCCAGCCTTTTCCAGCGTGGGGTAACCACGTTTGTGGAGAGAACCCTGGATCTGGTGTACAAGCAGCGGCAGTCTTTT                             <  1:147539/125‑1                                                                                                                                                ATCCTGACGATTTCAGGGAGTATTTTCCCGACTACAACGGGAAAAATTCCAGCCTTTTCCAGCGTGGGGTAACCACGTTTGTGGAGAGAACCCTGGATCTGGTGTACAAGCAGCGGCAGTCTTTT                             >  2:147539/1‑125                                                                                                                                                    TGACGATTTCAGGGAGTATTTTCCCGACTACAACGGGAAAAATTCCAGCCTTTTCCAGCGTGGGGTAACCACGTTTGTGGAGAGAACCCTGGATCTGGTGTACAAGCAGCGGCAGTCTTTTCTCTTGGATGGCACCCTCGCCAACCTT  >  3:314530/1‑148                                                                                                                                                     GACGATTTCAGGGAGTATTTTCCCGACTACAACGGGAAAAATTCCAGCCTTTTCCAGCGTGGGGTAACCACGTTTGTGGAGAGAACCCTGGATCTGGTGTACAAGCAGCGGCAGTCTTTT                             >  3:198863/1‑120                                                                                                                                                     GACGATTTCAGGGAGTATTTTCCCGACTACAACGGGAAAAATTCCAGCCTTTTCCAGCGTGGGGTAACCACGTTTGTGGAGAGAACCCTGGATCTGGTGTACAAGCAGCGGCAGTCTTTT                             <  4:198863/120‑1                                                                                                                                                                                                                                                                                                         AAAAGACTGCCGCTGCTTGTACACCAGATCCAGGGTTCTCTCCACAAACGTGGTTACCCCACGCTGGAAAAGGCTGGAATTTTTCCCGTTGTAGTCGGGAAAATACTCCCTGAAATCGTCAGGATCGATACGTAGCGCACTAGATCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2674362‑2674214 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcctgACGATTTCAGGGAGTATTTTCCCGACTACAACGGGAAAAATTCCAGCCTTTTCCAGCGTGGGGTAACCACGTTTGTGGAGAGAACCCTGGATCTGGTGTACAAGCAGCGGCAGTCTTTTCTCTTGGATGGCACCCTCGCCAACCTT  >  NC_002947/2674244‑2674389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.