New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2765041 = | 45 (0.810) | 5 (0.100) | 5/242 | NT | 10.6% | noncoding (183/199 nt) | PP_mr33 | Cobalamin regulatory region |
? | NC_002947 | 2765088 = | 42 (0.800) | noncoding (136/199 nt) | PP_mr33 | Cobalamin regulatory region |
GAACTAACAGGGAATCCCAGGCCTGCCAATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCCGGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2765195‑2765041 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcctTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTGTTAGTTCCGTGGTGGAAACCGGCGGCCCGCATGGTAGACCATC > NC_002947/2765088‑2765231 GAACTAACAGGGAATCCCAGGCCTGCCAATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCCGGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGC > 1:138290/1‑149 TAACAGGGAATCCCAGGCCTGCCAATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCCTCGATGCCACTGGGCCTGCCGCCCGGGAAGGCGGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGg > 6:88929/1‑148 ACAGGGAATCCCAGGCCTGCCAATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCCGGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCC > 4:343418/1‑148 ACAGGGAATCCCAGGCCTGCCAATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCCGGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCC < 5:4740/144‑1 ACAGGGAATCCCAGGCCTGCCAATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCCGGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCC > 6:4740/1‑144 GGGAATCCCAGGCCTGCCAATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCAAGGAAGGCCGGAGCAGGTCCGTGACGCACAAGTCAGGAGACCTGCCGGCCTcca > 1:293705/1‑146 AATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCCGGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCT < 3:145118/128‑1 AATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCCGGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCT > 4:145118/1‑128 GGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGA > 5:254056/1‑79 GGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGA < 6:254056/79‑1 GGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCC > 3:56835/1‑149 GAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCT > 8:132771/1‑149 GCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTGTTA < 7:132771/149‑1 GGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTGTTAGTTCCGTGGTGGAAACCGGCGGCCCGCATGGTAGACCATC > 7:177261/1‑149 GCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTGTTAGTTCCGTGGTGGAAACCG < 6:58370/126‑1 GCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTGTTAGTTCCGTGGTGGAAACCG > 5:58370/1‑126 GCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAG > 6:131914/1‑90 GCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAG < 5:131914/90‑1 GAACTAACAGGGAATCCCAGGCCTGCCAATACAGGCCAATCGGAACTGCCCCCGCAACTGTAGGTGCCGAGCCTGCTCCATCGATGCCACTGGGCCTGCCGCCCGGGAAGGCCGGAGCCGGGCCGTGACGCACCAGTCAGGAGACCTGCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2765195‑2765041 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcctTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTGTTAGTTCCGTGGTGGAAACCGGCGGCCCGCATGGTAGACCATC > NC_002947/2765088‑2765231 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |