New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2793928 =	63 (1.140)	4 (0.080)	4/246	NT	6.4%	coding (76/186 nt)	PP_2446	hypothetical protein
	?	NC_002947	2793958 =	56 (1.050)					coding (46/186 nt)	PP_2446	hypothetical protein

ACGTCACAGACGAAGGGCTAGACTAAAGCAGTGTCTGGAAGGTAAACGCGGCCCAATCAAGCGCTTGCCGCAAAGATGGAGGCACAGATGAGCCTGACCATGGCAATTCTCATGCTGGTAGGCATGTGGCTGAGCGTCGCAGCCGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2794078‑2793928 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTGATTGGGCCGCGTTTACCTTCCAGACACTGCTTTAGTCTAGCCCTTCGTCTGTGACGTTCCATCGAACAATGGTCTATCTCTAGG  >  NC_002947/2793958‑2794105                                                                                                                                                                                                                                                                                                             ACGTCACAGACGAAGGGCTAGACTAAAGCAGTGTCTGGAAGGTAAACGCGGCCCAATCAAGCGCTTGCCGCAAAGATGGAGGCACAGATGAGCCTGACCATGGCAATTCTCATGCTGGTAGGCATGTGGCTGAGCGTCGCAGCCGCCAT                                                                                                                                                        <  2:76116/149‑1                                                                                                                ATGCTGGTAGGCATGTGGCTGAGCGTCGCAGCCGCCATGCCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTGATTGGGCCGCGTTTACCTTCCAG                                                               <  5:61337/127‑1                                                                                                                ATGCTGGTAGGCATGTGGCTGAGCGTCGCAGCCGCCATGCCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTGATTGGGCCGCGTTTACCTTCCAG                                                               >  6:61337/1‑127                                                                                                                           CATGTGGCTGAGCGTCGCAGCCGCCATGCCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTG                                                                                      <  7:50294/93‑1                                                                                                                           CATGTGGCTGAGCGTCGCAGCCGCCATGCCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTG                                                                                      >  8:50294/1‑93                                                                                                                                                       CCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTGATTGGGCCGCGTTTACCTTCCAGACACTGCTTTAGTCTAGCCCTTCGTCTGTGACGTTCCATCGAACAATGGTCTATCTCTAGG  <  1:76116/149‑1                                                                                                                                                       CCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTGATTGGGCCGCGTTTACCTTCCAGACACTGCTTTAGTCTAGCCCTTCGTCTGTGACGTTCCATCGAACAATGGTCTATCTCTAGG  <  6:126341/149‑1                                                                                                                                                       CCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTGATTGGGCCGCGTTTACCTTCCAGACACTGCTTTAGTCTAGCCCTTCGTCTGTGACGTTCCATCGAACAATGGTCTATCTCTAGG  <  8:220673/149‑1                                                                                                                                                       CCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTGATTGGGCCGCGTTTACCTTCCAGACACTGCTTTAGTCTAGCCCTTCGTCTGTGACGTTCCATCGAACAATGGTCTATCTCTAGG  <  8:49394/149‑1                                                                                                                                                                                                                                                                                                             ACGTCACAGACGAAGGGCTAGACTAAAGCAGTGTCTGGAAGGTAAACGCGGCCCAATCAAGCGCTTGCCGCAAAGATGGAGGCACAGATGAGCCTGACCATGGCAATTCTCATGCTGGTAGGCATGTGGCTGAGCGTCGCAGCCGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2794078‑2793928 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcCTACCAGCATGAGAATTGCCATGGTCAGGCTCATCTGTGCCTCCATCTTTGCGGCAAGCGCTTGATTGGGCCGCGTTTACCTTCCAGACACTGCTTTAGTCTAGCCCTTCGTCTGTGACGTTCCATCGAACAATGGTCTATCTCTAGG  >  NC_002947/2793958‑2794105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.