| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3118871 = | 56 (1.010) | 3 (0.060) | 3/248 | NT | 6.0% | coding (570/810 nt) | PP_2735 | hypothetical protein |
| ? | NC_002947 | 3118971 = | 39 (0.730) | coding (470/810 nt) | PP_2735 | hypothetical protein | |||||
TGTGTCGCCGTTCATGCCGTTGGACATGGACTATCGCCTGCGCTTTTTCCTGGACACGGACCATGTACGCATTCAGATGCAGAACTGGCAAGGCGGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3118970‑3118871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaTGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCGGGAGTACGTAATGAAAGCGTTCACGCCAGGGCGTGTTGCGCACTTCCATCAGGATCGCGGTCAGGCACCCGTCACGGTCATGGCAGAAATAGAAACTCA > NC_002947/3118971‑3119118 TGTGTCGCCGTTCATGCCGTTGGACATGGACTATCGCCTGCGCTTTTTCCTGGACACGGACCATGTACGCATTCAGATGCAGAACTGGCAAGGCGGCACATGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCG > 5:237007/1‑149 CCGTTGGACATGGAATATCGCCTGCGCTTTTTCCTGGACACGGACCATGTACGCATTCAGATGCAGAACTGGCAAGGCGGCACATGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCGGGAGTACGTAATGAA < 3:272216/148‑1 TTGGACATGGACTATCGCCTGCGCTTTTTCCTGGACACGGACCATGTACGCATTCAGATGCAGAACTGGCAAGGCGGCACATGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCGGGAGTACGTAATGAAAGCG < 6:237007/149‑1 ACATGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCGGGAGTACGTAATGAAAGCGTTCACGCCAGGGCGTGTTGCGCACTTCCATCAGGATCGCGGTCAGGCACCCGTCACGGTCATGGCAGAAATAGAAACT > 5:237037/1‑149 ATGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCGGGAGTACGTAATGAAAGCGTTCACGCCAGGGCGTGTTGCGCACTTCCATCAGGATCGCGGTCAGGCACCCGTCACGGTCATGGCAGAAATAGAAACTCA > 5:131063/1‑149 ATGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCGGGAGTACGTAATGAAAGCGTTCACGCCAGGGCGTGTTGCGCACTTCCATCAGGATCGCGGTC < 5:309899/112‑1 ATGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCGGGAGTACGTAATGAAAGCGTTCACGCCAGGGCGTGTTGCGCACTTCCATCAGGATCGCGGTC > 6:309899/1‑112 TGTGTCGCCGTTCATGCCGTTGGACATGGACTATCGCCTGCGCTTTTTCCTGGACACGGACCATGTACGCATTCAGATGCAGAACTGGCAAGGCGGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3118970‑3118871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaTGGAAGGCCTTGCCGACGCTGAAGGGCCTGGCAAGGTTGCCTTGCACCGGGAGTACGTAATGAAAGCGTTCACGCCAGGGCGTGTTGCGCACTTCCATCAGGATCGCGGTCAGGCACCCGTCACGGTCATGGCAGAAATAGAAACTCA > NC_002947/3118971‑3119118 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |