| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3123544 = | 54 (0.980) | 3 (0.060) | 3/244 | NT | 6.0% | intergenic (+91/+71) | PP_2740/PP_2741 | MerR family transcriptional regulator/membrane protein |
| ? | NC_002947 | 3123586 = | 42 (0.800) | intergenic (+133/+29) | PP_2740/PP_2741 | MerR family transcriptional regulator/membrane protein | |||||
CCTGGGCGACCCCGAGCAGCCCAAATGGGTGCCCAAGGAGCAGTGGCACGCGGCCCCGTCCAAACCTGAAAACACCGGGTGAGCAATGAGGCCTCAGGTGCCGCGCAATGATCACCGGCCCACAGACCGCCAGCAGGACATTGGAGACGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3123696‑3123544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgaTCATTGCGCGGCACCTGAGGCCTCATTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGCACCCATTTGGGCTGCTCGGGGTCGCCCAGGTAGTGAGGCGACATGATTTGCACCCCATACTCGTT > NC_002947/3123586‑3123731 CCTGGGCGACCCCGAGCAGCCCAAATGGGTGCCCAAGGAGCAGTGGCACGCGGCCCCGTCCAAACCTGAAAACACCGGGTGAGCAATGAGGCCTCAGGTGCCGCGCAATGATCACCGGCCCACAGACCGCCAGCAGGACATTGGAGACG > 1:350327/1‑149 GGGCGCCCCCGAGCAGCCCAAATGGGTGCCCAAGGAGCAGTGGCACGCGGCCCCGTCCAAACCTGAAAACACACGGTGAGGAATGAGGCCTCAGGTGCCGCGCAATGATCACCGGCCCACAGACCGCCAGCAGGACATAGGAGACGGT > 4:236315/1‑148 CCAAATGGGTGCCCAAGGAGCAGTGGCACGCGGCCCCGTCCAAACCTGAAAACACCGGGTGAGCAATGAGGCCTCAGGTGCCGCGCAATGATCACCGGCCCACAGACCGCCAGCAGGACATTGGAGACGGTGA < 7:87431/133‑1 CCAAATGGGTGCCCAAGGAGCAGTGGCACGCGGCCCCGTCCAAACCTGAAAACACCGGGTGAGCAATGAGGCCTCAGGTGCCGCGCAATGATCACCGGCCCACAGACCGCCAGCAGGACATTGGAGACGGTGA > 8:87431/1‑133 TGATCACCGGCCCACAGACCGCCAGCAGGACATTGGAGACGGTGATCATTGCGCGGCACCTGAGGCCTCATTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGCACCCATTTGGGCTGCTCGGGGTC > 8:160589/1‑149 ATCACCGGCCCACAGACCGCCAGCAGGACATTGGAGACGGTGATCATTGCGCGGCACCTGAGGCCTCATTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGC > 7:60682/1‑124 ATCACCGGCCCACAGACCGCCAGCAGGACATTGGAGACGGTGATCATTGCGCGGCACCTGAGGCCTCATTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGC < 8:60682/124‑1 CGGTGATCATTGCGCGGCACCTGAGGCCTCATTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGCACCCATTTGGGCTGCTCGGGGTCGCCCAGGTAGTGAGGCGACATGATTTGCACCCCATACTC < 7:160589/149‑1 GTGATCATTGCGCGGCACCTGAGGCCTCTTTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGCACCCATTTGGGCTGCTCGGGGTCGCCCAGGTAGTGAGGCGACATGATTTGCACCCCATACTCGT > 1:201816/1‑149 GTGATCATTGCGCGGCACCTGAGGCCTCATTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGCACCCATTTGGGCTGCTCGGGGTCGCCCAGGTAGTGAGGCGACATGATTTGCACCCCATACTCGT < 1:101161/149‑1 TGATCATTGCGCGGCACCTGAGGCCTCATTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGCACCCATTTGGGCTGCTCGGGGTCGCCCAGGTAGTGAGGCGACATGATTTGCACCCCATACTCGTT < 3:201512/149‑1 CCTGGGCGACCCCGAGCAGCCCAAATGGGTGCCCAAGGAGCAGTGGCACGCGGCCCCGTCCAAACCTGAAAACACCGGGTGAGCAATGAGGCCTCAGGTGCCGCGCAATGATCACCGGCCCACAGACCGCCAGCAGGACATTGGAGACGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3123696‑3123544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgaTCATTGCGCGGCACCTGAGGCCTCATTGCTCACCCGGTGTTTTCAGGTTTGGACGGGGCCGCGTGCCACTGCTCCTTGGGCACCCATTTGGGCTGCTCGGGGTCGCCCAGGTAGTGAGGCGACATGATTTGCACCCCATACTCGTT > NC_002947/3123586‑3123731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |