| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3196232 = | 43 (0.780) | 4 (0.080) | 4/244 | NT | 8.6% | intergenic (‑166/+26) | dhaT/PP_2804 | 1,3‑propanediol dehydrogenase/alpha/beta family hydrolase |
| ? | NC_002947 | 3196277 = | 44 (0.830) | coding (857/876 nt) | PP_2804 | alpha/beta family hydrolase | |||||
GGCGGGTTTGCCACGGCGTCGGCGATTCGCGGCGCCAACCTGGTGCTGCTGCCCGGGATGGGGCATGACTTGCCGACGTGCCTGTCGGGCACGCTGCTGTCCCTGCTGACGGGGCACATGCGTTAGCACAGATTTTCTTTTAGGGGCCCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3196383‑3196232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgtcAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGGCAAACCCGCCGTTGGTGGCGACCATGAGGTCTTTGTCGCCATGAATGAC > NC_002947/3196277‑3196422 GGCGGGTTTGCCACGGCGTCGGCGATTCGCGGCGCCAACCTGGTGCTGCTGCCCGGGATGGGGCATGACTTGCCGACGTGCCTGTCGGGCACGCTGCTGTCCCTGCTGACGGGGCACATGCGTTAGCACAGATTTTCTTTTAGTGGC > 8:330864/1‑147 CCTGCTGGCGGGGCACATGCGTTAGCACAGATTTTCTTTTAGGGGCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGG > 5:327119/1‑148 TGACGGGGCACATGCGTTAGCACAGATTTTCTTTTAGGGGCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAA > 3:58969/1‑84 TGACGGGGCACATGCGTTAGCACAGATTTTCTTTTAGGGGCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAA < 4:58969/84‑1 CGTTAGCACAGATTTTCTTTTAGGGGCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGGCAAACCCGCCGTTGGTGGC < 6:327119/148‑1 CCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGGCAAACCCGCCGTTGGTGGCGACCATGAGGTCTTTGTCGCCATGAAT < 7:105547/149‑1 GTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGGCAAACCCGCCGTTGGTGGCGACCATGAGGTCTTTGTCGCCATGAATGAC < 6:271780/149‑1 GGCGGGTTTGCCACGGCGTCGGCGATTCGCGGCGCCAACCTGGTGCTGCTGCCCGGGATGGGGCATGACTTGCCGACGTGCCTGTCGGGCACGCTGCTGTCCCTGCTGACGGGGCACATGCGTTAGCACAGATTTTCTTTTAGGGGCCCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3196383‑3196232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgtcAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGGCAAACCCGCCGTTGGTGGCGACCATGAGGTCTTTGTCGCCATGAATGAC > NC_002947/3196277‑3196422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |