New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3196232 =	43 (0.780)	4 (0.080)	4/244	NT	8.6%	intergenic (‑166/+26)	dhaT/PP_2804	1,3‑propanediol dehydrogenase/alpha/beta family hydrolase
	?	NC_002947	3196277 =	44 (0.830)					coding (857/876 nt)	PP_2804	alpha/beta family hydrolase

GGGCATCCGCGCCTGGCCGTGTTTAACGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGGCAA  >  NC_002947/3196086‑3196376                                                                                                                                                   |                                                                                                                                                 gtcattcatggcgacaaagacctcatggtcgccaccaacggcgggtttgccacggcgtcggcgattcgcggcgccaacctggtgctgctgcccgggatggggcatgacttgccgacgtgcctgtcgggcacgctgctgtccctgctGAc                                                                                                                                                <  6:271780‑M1/3‑1 (MQ=255)   gCATCCGCGCCTGGCCGTGTTTAACGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACgg                                                                                                                                              <  1:346871/149‑1 (MQ=255)    attcatggcgacaaagacctcatggtcgccaccaacggcgggtttgccacggcgtcggcgattcgcggcgccaacctggtgctgctgcccgggatggggcatgacttgccgacgtgcctgtcgggcacgctgctgtccctgctGACggg                                                                                                                                             <  7:105547‑M1/6‑1 (MQ=255)        cgcgCCTGGCCGTGTTTAACGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGccc                                                                                                                                          <  6:3360/148‑1 (MQ=255)                gCCGTGTTTAACGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGa                                                                                                                                  <  2:131506/148‑1 (MQ=255)                  cGTGTTTAACGGCTCGGGCGTGTAATCTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTCGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGaaaa                                                                                                                               <  4:315627/149‑1 (MQ=255)                   gtgtTTAACGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGaaaa                                                                                                                               >  3:110207/1‑148 (MQ=255)                      tttAACGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCtg                                                                                                                           >  5:242722/1‑149 (MQ=255)                       ttAACGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCtgt                                                                                                                          >  5:149089/1‑149 (MQ=255)                          aCGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGc                                                                                                                        <  4:131507/148‑1 (MQ=255)                            ggCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTaa                                                                                                                     <  5:9476/149‑1 (MQ=255)                               gccaccaacggcgggtttgccacggcgtcggcgattcgcggcgccaacctggtgctgctgcccgggatggggcatgacttgccgacgtgcctgtcgggcacgctgctgtccctgctGACGGGCCCCTAAAAGAAAATCTGTGCTAACg                                                                                                                   <  6:327119‑M1/32‑1 (MQ=255)                                        tAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGcccc                                                                                                         <  3:309008/149‑1 (MQ=255)                                         aaTGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCg                                                                                                        >  6:240975/1‑149 (MQ=255)                                              gggCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTcag                                                                                                    >  3:83702/1‑148 (MQ=255)                                                  ccacggcgtcggcgattcgcggcgccaacctggtgctgctgcccgggatggggcatgacttgccgacgtgcctgtcgggcacgctgctgtccctgctGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGCCAGCAgg                                                                                                >  5:327119‑M1/98‑148 (MQ=255)                                                   tGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGACCCGTCAGCAGGGa                                                                                              >  1:277313/1‑149 (MQ=255)                                                    ggCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGCCCAAGCGACGGGCCCCTAAAAGAAAAGCTGTGCTAAAGGATGTGCCCCGTCAGCAGGGa                                                                                              >  8:97929/1‑148 (MQ=255)                                                       ggTTACTCAGGTGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGTAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGGATGTGCCCCGTCAGCAGGGAcagc                                                                                          <  4:110207/149‑1 (MQ=255)                                                                cGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGccc                                                                                 <  8:261146/149‑1 (MQ=255)                                                                    ccTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACa                                                                             <  6:149089/149‑1 (MQ=255)                                                                     cTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAg                                                                            >  4:331858/1‑149 (MQ=255)                                                                      tGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCAtgt                                                                                                              <  2:210172/114‑1 (MQ=255)                                                                       gAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGc                                                                          >  8:191362/1‑149 (MQ=255)                                                                        aaTGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGc                                                                          <  4:83702/148‑1 (MQ=255)                                                                            ttgttgttTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTc                                                                     <  7:97929/149‑1 (MQ=255)                                                                                  ttttGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCaa                                                                <  2:277313/148‑1 (MQ=255)                                                                                   tttGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGACGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAg                                                               <  5:240975/148‑1 (MQ=255)                                                                                         tCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGcc                                                        <  3:331858/149‑1 (MQ=255)                                                                                            tGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGcccc                                                      >  4:240254/1‑148 (MQ=255)                                                                                                    ccTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCggg                                              >  8:282445/1‑148 (MQ=255)                                                                                                     cTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCATGACTTGccgacgt                                                   <  8:328470/142‑6 (MQ=255)                                                                                                     cTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCATGACTTGccgacgt                                                   >  7:328470/1‑137 (MQ=255)                                                                                                        ttGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAAAGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCCTCCCGGgcagca                                         >  4:113116/1‑149 (MQ=255)                                                                                                            gAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCAc                                     >  2:33068/1‑149 (MQ=255)                                                                                                            gAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCAc                                     <  3:240254/149‑1 (MQ=255)                                                                                                             ttgccgacgtgcctgtcgggcacgctgctgtccctgctGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTca                                                                                                     <  4:58969‑M1/46‑1 (MQ=255)                                                                                                             ttgccgacgtgcctgtcgggcacgctgctgtccctgctGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTca                                                                                                     >  3:58969‑M1/39‑84 (MQ=255)                                                                                                               aaGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAg                                  <  1:33068/149‑1 (MQ=255)                                                                                                                      cAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGgcagca                                         <  4:289791/135‑1 (MQ=255)                                                                                                                      cAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGgcagca                                         >  3:289791/1‑135 (MQ=255)                                                                                                                       aGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTg                              >  5:52842/1‑145 (MQ=255)                                                                                                                       aGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTg                              <  6:52842/145‑1 (MQ=255)                                                                                                                         cGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCa                                                                         <  7:78576/100‑1 (MQ=255)                                                                                                                         cGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCa                                                                         >  8:78576/1‑100 (MQ=255)                                                                                                                             aTAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGaa                    <  7:282445/149‑1 (MQ=255)                                                                                                                                  aaGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGt                                >  6:110128/1‑132 (MQ=255)                                                                                                                                  aaGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGt                                <  5:110128/132‑1 (MQ=255)                                                                                                                                    gagGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGa             <  7:191362/149‑1 (MQ=255)                                                                                                                                            aCCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTgg     >  7:330864/1‑149 (MQ=255)                                                                                                                                               aaGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGGCaa  >  5:266796/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                 GGGCATCCGCGCCTGGCCGTGTTTAACGGCTCGGGCGTGTAATGTGGGCCTGGCGGTTACGCACGGGCCTGAATGTTGTTGTTTTGGGTCTTGCGTAAACCTGTTGCGAAAAGGCTCCAGCGGAATAAAAAGAGGGGCGACCAAGCGACGGGCCCCTAAAAGAAAATCTGTGCTAACGCATGTGCCCCGTCAGCAGGGACAGCAGCGTGCCCGACAGGCACGTCGGCAAGTCATGCCCCATCCCGGGCAGCAGCACCAGGTTGGCGCCGCGAATCGCCGACGCCGTGGCAA  >  NC_002947/3196086‑3196376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.