New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3394090	46 (0.830)	4 (0.080)	4/244	NT	7.9%	coding (317/900 nt)	PP_2997	protein CnmA
	?	NC_002947	= 3394125	49 (0.930)					coding (282/900 nt)	PP_2997	protein CnmA

CACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3393942‑3394090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgcCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGATGCCAGCCACATCACCTTGCTGCCCAGCATCCTCAACCATCTGCGCAGCCATGCGCCGGGCATCCGCCTGGAGGCGGCGCGGATCGACGGCAATACCGAGAGCGCGCT  <  NC_002947/3394125‑3393979                                                                                                                                                                                                                                                                                                          CACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGC                                                                                                                                                     <  6:97622/149‑1          GATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCCGCCACAGC                                                                                                                                            >  6:182483/1‑149               CCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCG                                                                                                                                                      >  3:161073/1‑134               CCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCG                                                                                                                                                      <  4:161073/134‑1                                      AGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGC                                                                                                                >  5:168336/1‑149                                      AGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGC                                                                                                                <  6:168336/149‑1                                         GCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGAT                                                                                                             <  5:182483/149‑1                                                                                                                                                 ATCGCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGATGCCAGCCACATCACCTTGCTGCCCAGCATCCTCAACCATCTGCGCAGCCATGCGCCGGGCATCCGCCTGGAGGCGGCGCGGATCGACGGCAATACCGAGAGCGC     >  2:61903/1‑149                                                                                                                                                  TCGCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGATGCCAGCCACATCACCTTGCTGCCCAGCATCCTCAACCATCTGCGCAGCCATGCGCCGGGCATCCGCCTGGAGGCGGCGCGGATCGACGGCAATACCGAGAGCGCG    >  4:255970/1‑149                                                                                                                                                  TCGCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGATGCCAGCCACATCACCTTGCTGCCCAGCATCCTCAACCATCTGCGCAGCCATGCGCCGGGCATCCGCCTGGAGGCGGCGCGGATCGACGGCAATACCGAGAGCGCG    >  6:87073/1‑149                                                                                                                                                  TCGCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGATGCCAGCCACATCACCTTGCTGCCCAGCATCCTCAACCATCTGCGCAGCCATGCGCCGGGCATCCGCCTGGAGGCGGCGC                              <  5:179322/123‑1                                                                                                                                                  TCGCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGATGCCAGCCACATCACCTTGCTGCCCAGCATCCTCAACCATCTGCGCAGCCATGCGCCGGGCATCCGCCTGGAGGCGGCGC                              >  6:179322/1‑123                                                                                                                                                    GCCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGATGCCAGCCACATCACCTTGCTGCCCAGCATCCTCAACCATCTGCGCAACCATGCGCCGGGCATCCGCCTGGAGGCGGCGCGGATCGACGGCAATACCGAGAGCGCGCT  >  4:244348/1‑149                                                                                                                                                                                                                                                                                                          CACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3393942‑3394090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgcCGCCACAGCGCAGCGGCGTTTTCGCCTGTGTGTCAGCGATGCCAGCCACATCACCTTGCTGCCCAGCATCCTCAACCATCTGCGCAGCCATGCGCCGGGCATCCGCCTGGAGGCGGCGCGGATCGACGGCAATACCGAGAGCGCGCT  <  NC_002947/3394125‑3393979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.