New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3542564 =	58 (1.050)	4 (0.080)	4/240	NT	7.4%	coding (159/966 nt)	galE	UDP‑glucose 4‑epimerase
	?	NC_002947	3542609 =	46 (0.890)					coding (114/966 nt)	galE	UDP‑glucose 4‑epimerase

TATCTGGTTGTGGGTGGTGCGGGCTACATTGGCTCGCACATGGTCAAGCACCTGCTCGCCGCCGGCCATGAAGTGCTGGTGGCGGACCTGGTCTCACCTGGCCCCGGTATCCAGTGGGCCAAGCTCGACATCGCCGACGAAGCCGCACTGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3542716‑3542564 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactggatACCGGGGCCAGGTGAGACCAGGTCCGCCACCAGCACTTCATGGCCGGCGGCGAGCAGGTGCTTGACCATGTGCGAGCCAATGTAGCCCGCACCACCCACAACCAGATATTTCATCCCCACCTCCTGGAATCTGCTGTT  >  NC_002947/3542609‑3542746                                                                                                                                                                                                                                                                                                     TATCTGGTTGTGGGTGGTGCGGGCTACATTGGCTCGCACATGGTCAAGCACCTGCTCGCCGCCGGCCATGAAGTGCTGGTGGCGGACCTGGTCTCACCTGGCCCCGGTATCCAGTGGGACAAGCTAGAAATCGCCGACGAAGCCGCACT                                                                                                                                                >  8:308407/1‑149       GTTGTGGGTGGTGCGGGCTACATTGGCTCGCACATGGTCAAGCACCTGCTCGCCGCCGGCCATGAAGTGCTGGTGGCGGACCTGGTCTCACCTGGCCCCGGTATCCAGTGGGCCAAGCTCGACATCGCCGACGAAGCCGCACTGG                                                                                                                                              <  5:219546/145‑1                                                                                                       CCCGGTATCCAGTGGGCCAAGCTCGTCATCGCCGACGAAGCCGCACTGGATACCGGGGCCAGGTGAGACCAGGTCCGCCACCAGCACTTCATGGCCGGCGGCGAGCAGGTGCTTGACCATGTGCGAGCCAATGTAGCCCGCACCACCCA                                          >  1:304430/1‑149                                                                                                            TATCCAGTGGGCCAAGCTCGACATCGCCGACGAAGCCGCACTGGATACCGGGGCCAGGTGAGACCAGGTCCGCCACCAGCACTTCATGGCCGGCGGCGAGCAGGTGCTTGACCATGTGCGAGCCAATGTAGCCCGCACCACCCACAAC                                      >  7:150455/1‑148                                                                                                             ATCCAGTGGGCCAAGCTCGACATCGCCGACGAAGCCGCACTGGATACCGGGGCCAGGTGAGACCAGGTCCGCCACCAGCACTTCATGGCCGGCGGCGAGCAGGTGCTTGACCATGTGCGAGCCAATGTAGCCCGCACCACCCACAAC                                      >  6:136289/1‑147                                                                                                                                            AAGCCGCACTGGATACCGGGGCCAGGTGAGACCAGGTCCGCCACCAGCACTTCATGGCCGGCGGCGAGCAGGTGCTTGACCATGTGCGAGCCAATGTAGCCCGCACCACCCACAACCAGATATTTCATCCCCACCTCCTGGAATCTGCT     <  8:150455/149‑1                                                                                                                                               CCGCACTGGATACCGGGGCCAGGTGAGACCAGGTCCGCCACCAGCACTTCATGGCCGGCGGCGAGCAGGTGCTTGACCATGTGCGAGCCAATGTAGCCCGCACCACCCACAACCAGATATTTCATCCCCACCTCCTGGAATCTGCTGTT  <  2:304430/149‑1                                                                                                                                                                                                                                                                                                     TATCTGGTTGTGGGTGGTGCGGGCTACATTGGCTCGCACATGGTCAAGCACCTGCTCGCCGCCGGCCATGAAGTGCTGGTGGCGGACCTGGTCTCACCTGGCCCCGGTATCCAGTGGGCCAAGCTCGACATCGCCGACGAAGCCGCACTGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3542716‑3542564 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactggatACCGGGGCCAGGTGAGACCAGGTCCGCCACCAGCACTTCATGGCCGGCGGCGAGCAGGTGCTTGACCATGTGCGAGCCAATGTAGCCCGCACCACCCACAACCAGATATTTCATCCCCACCTCCTGGAATCTGCTGTT  >  NC_002947/3542609‑3542746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.