New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3610726 =	48 (0.870)	4 (0.080)	4/238	NT	8.1%	coding (2958/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	3610778 =	46 (0.890)					coding (2906/3396 nt)	mcoA	Mn(II) copper oxidase A

AACAAACCACCTGTCGTGGCCAACGACAGTGCCGCAACGACTGCAGGCAAGCCGATCACCCTGAACG‑TGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGTGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3610881‑3610726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtgagcGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGGCACTGTCGTTGGCCACGACAGGTGGTTTGTTGGCCGGGTCGTCATCGTCGTCATCGGTTTTGGTGCGGAACGTTG  >  NC_002947/3610778‑3610925                                                                                                                                                                                                                                                                                                                   AACAAACCACCTGTCGTGGCCAACGACAGTGCCGCAACGACTGCAGGCAAGCCGATCACCCTGAACG‑TGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTAC                                                                                                                                                             >  7:180863/1‑149    AAACCACCTGTCGTGGCCAACGACAGTGCCGCAACGACTGCAGGCAAGCCGATCACCCTGAACG‑TGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGT                                                                                                                                                          >  3:248628/1‑149       ggcaCTGTCGTTGGCCACGACAGTGCCGCAACGACTGCAGGCAAGCCGATCACCCTGAACGATGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGT                                                                                                                                                          >  1:103434/5‑147       CCACCTGTCGTGGCCAACGACAGTGCCGCAACGACTGCAGGCAAGCCGATCACCCTGAACG‑TGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGTGAG                                                                                                                                                       >  2:55751/1‑149       CCACCTGTCGTGGCCAACGACAGTGCCGCAACGACTGCAGGCAAGCCGATCACCCTGAACG‑TGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGTGAG                                                                                                                                                       <  6:45289/149‑1                                                           CCCTGAACG‑TGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGT                                                                                                                                                          >  1:163778/1‑94                                                           CCCTGAACG‑TGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGT                                                                                                                                                          <  2:163778/94‑1                                                                                                           CTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGTGAGCGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGG                                                                             <  5:287478/124‑1                                                                                                           CTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGTGAGCGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGG                                                                             >  6:287478/1‑124                                                                                                              ACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGTGAGCGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGGCACTGTCGTTGGCCACGACAGGTGGTTT                                                 >  5:123182/1‑149                                                                                                                 GTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGTGAGCGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGGCACTGTCGTTGGCCACGACAGGTGGTTTGTT                                              <  6:123182/149‑1                                                                                                                                                     ACCGTGAGCGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGGCACTGTCGTTGGCCACGACAGGTGGTTTGTTGGCCGGGTCGTCATCGTCGTCATCGGTTTTGGTGC           <  7:172646/148‑1                                                                                                                                                           AGCGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGGCACTGTCGTTGGCCACGACAGGTGGTTTGTTGGCCGGGTCGTCATCGTCGTCATCGGTTTTGGTGCGGAACGT    <  2:37021/149‑1                                                                                                                                                             CGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGGCACTGTCGTTGGCCACGACAGGTGGTTTGTTGGCCGGGTCGTCATCGTCGTCATCGGTTTTGGTGCGGAACGTTG  <  1:186135/149‑1                                                                                                                                                                                                                                                                                                                   AACAAACCACCTGTCGTGGCCAACGACAGTGCCGCAACGACTGCAGGCAAGCCGATCACCCTGAACG‑TGCTGGCCAACGACAGCGACCCGGACGGCAACGTACCGCTCACGGTCACCGGCCTCAGCCAGCCGGACTCCGGCCAGGGTACCGTGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3610881‑3610726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtgagcGGTACGTTGCCGTCCGGGTCGCTGTCGTTGGCCAGCACGTTCAGGGTGATCGGCTTGCCTGCAGTCGTTGCGGCACTGTCGTTGGCCACGACAGGTGGTTTGTTGGCCGGGTCGTCATCGTCGTCATCGGTTTTGGTGCGGAACGTTG  >  NC_002947/3610778‑3610925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.