| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3825995 | 55 (0.990) | 3 (0.060) | 3/242 | NT | 5.4% | coding (51/1020 nt) | ptxS | 2‑ketogluconate utilization repressor |
| ? | NC_002947 | = 3826031 | 53 (1.010) | coding (15/1020 nt) | ptxS | 2‑ketogluconate utilization repressor | |||||
GCCGCGCTTTAGGCCGCGAGCCATCTGGTTGGGGCGATAGCCGAGGCGTTCGATGACCTCTTCCAGCCGCTTGGCCGTGGCTTCGGCCAGCAATTGGCGGTCGCCACCGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACACGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3825842‑3825995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcgccTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGTGGCGCGTGTTGCTGGCGTTTCCAAAGCCACCGTCTCCCGTTACATCGGTGGCGACCGCCAATTGCTGGCCGAAGCCACGGCCAAGCGGCTGGAAGAGGTCATCGAACGCCTC < NC_002947/3826031‑3825884 GCCGCGCTTTAGGCCGCGAGCCATCTGGTTGGGGCGATAGCCGAGGCGTTCGATGACCTCTTCCAGCCGCTTGGCCGTGGCTTCGGCCAGCAATTGGCGGTCGCCACCGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACAC > 1:34874/1‑149 CGCTTTAGGCCGCGAGCCATCTGGTTGGGGCGATAGCCGAGGCGTTCGATGACCTCTTCCAGCCGCTTGGCCGTGGCTTCGGCCAGCAATTGGCGGTCGCCACCGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACACGCGC < 4:318031/149‑1 CGCTTTAGGCCGCGAGCCATCTGGTTGGGGCGATAGCCGAGGCGTTCGATGACCTCTTCCAGCCGCTTGGCCGTGGCGTCGGCCAGCAATTGGCGGTCGCCACCGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACACGCGC < 6:246486/149‑1 CGCTTTAGGCCGCGAGCCATCTGGTTGGGGCGATAGCCGAGGCGGTCGATGACCTCTTCCAGCCGCTTGGCCGTGGCTTCGGCCAGCAATTGGCGGTCGCCACCGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACACGCGC < 6:241237/149‑1 ATGACCTCTTCCAGCCGCTTGGCCGTGGCTTCGGCCAGCAATTGGCGGTCGCCACGGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACACGCGCCTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGTGGCGCGTGTTG < 4:351696/149‑1 CTCTTCCAGCCGCTTGGCCGTGGCTTCGGCCAGCAATTGGCGGTCGCCACCGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACACGCGCCTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGTGGCGCGTGTTGCTG < 3:151535/147‑1 CTCTTCCAGCCGCTTGGCCGTGGCTTCGGCCAGCAATTGGCGGTCGCCACCGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACACGCGCCTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGTGGCGCGTGTTGCTG > 4:151535/1‑147 GCCTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGTGGCGCGTGTTGCTGGCGTTTCCAAAGCCACCGTCTCCCGTTACATCGGTGGCGACCGCCAATTGCTGGCCGAAGCCACGGCCAAGCGGCTG < 7:143851/130‑1 GCCTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGTGGCGCGTGTTGCTGGCGTTTCCAAAGCCACCGTCTCCCGTTACATCGGTGGCGACCGCCAATTGCTGGCCGAAGCCACGGCCAAGCGGCTG > 8:143851/1‑130 CCTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGGGGCGCGTGTTGCTGGCGTTTCCAAAGCCACCGTCTCCCGTTACATCGGTGGCGACCGCCAATTGCTGGCCGAAGCCACGGCCAAGCGGCTGGAAGAGGTCATCGAACGCCT < 8:151488/149‑1 CTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGTGGCGCGTGTTGCTGGCGTTTCCAAAGCCACCGTCTCCCGTTACATCGGTGGCGACCGCCAATTGCTGGCCGAAGCCACGGCCAAGCGGCTGGAAGAGGTCATCGAACGCCTC < 4:235430/149‑1 GCCGCGCTTTAGGCCGCGAGCCATCTGGTTGGGGCGATAGCCGAGGCGTTCGATGACCTCTTCCAGCCGCTTGGCCGTGGCTTCGGCCAGCAATTGGCGGTCGCCACCGATGTAACGGGAGACGGTGGCTTTGGAAACGCCAGCAACACGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3825842‑3825995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcgccTGCCCATACCCGCGAACGGGTCACCATCAGTGAAGTGGCGCGTGTTGCTGGCGTTTCCAAAGCCACCGTCTCCCGTTACATCGGTGGCGACCGCCAATTGCTGGCCGAAGCCACGGCCAAGCGGCTGGAAGAGGTCATCGAACGCCTC < NC_002947/3826031‑3825884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |