New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 452887152 (0.940)4 (0.080) 3/240 NT 8.2% coding (471/1173 nt) PP_4017 hypothetical protein
?NC_002947 = 4528919 41 (0.790)coding (519/1173 nt) PP_4017 hypothetical protein

CTGGAAAACTTCCGCTTCCTGCCCAGCTGGCGTATCGATGACGTGATGATCAGCTTCGCCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4528722‑4528871
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccagGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGATCTTCCAGTTGCGCTGGCCGTGGCCTTGCAGCAGGAACACATCGTAGTTGTCGAAGTGCGGGCCGACGCTGCCACCCGGGGCGGCGAAGCT  <  NC_002947/4528919‑4528773
                                                                                                                                                                                                                                                                                                         
CTGGAAAACTTCCGCTTCCTGCCCAGCTGGCGTATCGATGACGTGATGATCAGCTTCGCCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGGC                                                                                                                                                        <  2:210981/147‑1
                                               GATCAGCTTCGCCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGGCCAGGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCA                                                                                                        >  7:294625/1‑148
                                                    GCTTCGCCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGG                                                                                                                                                         >  7:241249/1‑94
                                                    GCTTCGCCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGG                                                                                                                                                         <  8:241249/94‑1
                                                         GCCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGGCCAGGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGA                                                                                             <  8:294625/149‑1
                                                          CCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGGCCAGGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGA                                                                                             <  3:328435/148‑1
                                                          CCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGGCCAGGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGA                                                                                             >  4:328435/1‑148
                                                                                                                                                 GCCAGGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGATCTTCCAGTTGCGCTGGCCGTGGCCTTGCAGCAGGAACACATCGTAGTTGTCGAAGTGCGGGCCGACGCTGCCACCCGGGGCGGCG       >  5:96632/1‑147
                                                                                                                                                   CAGGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGATCTTCCAGTTGCGCTGGCCGTGGCCTTGCAGCAGGAACACATCGTAGTTGTCGAAGTGCGGGCCGACGCTGCCACCCGGGGCGGCGAAGC   <  2:303715/149‑1
                                                                                                                                                   CAGGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGATCTTCCAGTTGCGCTGGCCGTGGCCTTGCAGCAGGAACACATCGTAGTTGTCGAAGTGCGGGCCGACGCTGCCACCCGGGGCGGCGAAGC   <  8:188839/149‑1
                                                                                                                                                    AGGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGATCTTCCAGTTGCGCTGGCCGTGGCCTTGCAGCAGGAACACATCGTAGTTGTCGAAGTGCGGGCCGACGCTGCCACCCGGGGCGGCGAAGCT  <  5:61562/149‑1
                                                                                                                                                                                                                                                                                                         
CTGGAAAACTTCCGCTTCCTGCCCAGCTGGCGTATCGATGACGTGATGATCAGCTTCGCCGCCCCGGGTGGCAGCGTCGGCCCGCACTTCGACAACTACGATGTGTTCCTGCTGCAAGGCCACGGCCAGCGCAACTGGAAGATCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4528722‑4528871
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccagGATACGCAGGTCGGCGTGCTCCAGCAGCGGACTGTCACTGCTGCACATCTGGCCGATCTTCCAGTTGCGCTGGCCGTGGCCTTGCAGCAGGAACACATCGTAGTTGTCGAAGTGCGGGCCGACGCTGCCACCCGGGGCGGCGAAGCT  <  NC_002947/4528919‑4528773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.