| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4847141 = | 48 (0.870) | 3 (0.060) | 3/244 | NT | 6.3% | coding (1891/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
| ? | NC_002947 | 4847177 = | 43 (0.810) | coding (1927/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase | |||||
AGGCGGTCCAGTTTGTCATCCGGGCGCAGGCCGCCAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4847292‑4847141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggcTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCTGAAAGCCCTGCAGGCTGACGGGCGCAAGG > NC_002947/4847177‑4847321 AGGCGGTCCAGTTTGTCATCCGGGCGCAGGCCGCCAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGG < 3:62320/149‑1AGGCGGTCCAGTTTGTCATCCGGGCGCAGGCCGCCAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGG < 4:18802/149‑1 GGCGGTCCAGTTTGTCATCCGGGCGCAGGCCGCCAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGGG > 6:12778/1‑149 CAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGGGGC < 7:164592/118‑1 CAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGGGGC > 8:164592/1‑118 AGCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGGGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCAGTGGCGGCCTGCGCCCGGATGCCAAACTGGACC > 8:292491/1‑149 GCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGGGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCG < 3:224508/121‑1 GCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGGGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCG > 4:224508/1‑121 CGGGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCTGAAAGCCCTGCAGGCTGACGGGCGCAA < 6:184041/149‑1 GGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCTGAAAGCCCTGCAGGCTGACGGGCGCAAGG > 4:208679/1‑149 AGGCGGTCCAGTTTGTCATCCGGGCGCAGGCCGCCAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTGCAGGCAGCGAGCAGGGCCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4847292‑4847141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggcTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCTGAAAGCCCTGCAGGCTGACGGGCGCAAGG > NC_002947/4847177‑4847321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |