New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4881961 = | 52 (0.940) | 4 (0.080) | 3/242 | NT | 7.6% | coding (1044/1356 nt) | uacT | uric acid permease |
? | NC_002947 | 4882028 = | 48 (0.920) | coding (1111/1356 nt) | uacT | uric acid permease |
CACCACGGGGATCAACCCGAAGCCGACGCTCACGGCAACCAACAGCTGGTTGCGGCGGTCGCCGATGTCCGCCTCCTGAAGAATCTTGATCCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4882114‑4881961 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggatcAAGATTCTTCAGGAGGCGGACATCGGCGACCGCCGCAACCAGCTGTTGGTTGCCGTGAGCGTCGGCTTCGGGTTGATCCCCGTGGTGCGTCCGGAGTTCTTTGCCCAGATGCCACAGTGGATGGAGCCCATCACCCACAGCGG > NC_002947/4882028‑4882170 CACCACGGGGATCAACCCGAAGCCGACGCTCACGGCAACCAACAGCTGGTTGCGGCGGTCGCCGATGTCCGCCTCCTGAAGAATCTTGATCCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCG < 1:108964/149‑1 ACCACGGGGATCAACCCGAAGCCGACGCTCACGGCAACCAACAGCTGGTTGCGGCGGTCGCCGATGTCCGCCTCCTGAAGAATCTTGATCCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGG > 3:297228/1‑149 ACCACGGGGATCAACCCGAAGCCGACGCTCACGGCAACCAACAGCTGGTTGCGGCGGTCGCCGATGTCCGCCTCCTGAAGAATCTTGATCCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGG < 5:340364/149‑1 ACGGGGATCAACCCGAAGCCGACGCTCACGGCAACCAACAGCTGGTTGCGGCGGTCGCCGATGTCCGCCTCCTGAAGAATCTTGATCCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGGGAT > 8:286633/1‑149 CCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGGGATCAAGATTCTTCAGGAGGCGGACATCGGCGACCGCCGCAACCAGCTGTTGGTTGCCGTGAGCGTCGGCTTCGGGTTGATCCCCGAGG > 1:124092/1‑149 CCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGGGATCAAGATTCTTCAGGAGGCGGACATCGGCGACCGCCGCAACCAGCTGTTGGTTGCCGTGAGCGTCGGCTTCGGGTTGATCCCC > 7:70973/1‑145 CCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGGGATCAAGATTCTTCAGGAGGCGGACATCGGCGACCGCCGCAACCAGCTGTTGGTTGCCGTGAGCGTCGGCTTCGGGTTGATCCCC < 8:70973/145‑1 CCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGGGATCAAGATTCTTCAGGAGGCGGACATCGGCGACCGCCGCAACCAGCTGTTGGTTGCCGTGAGCGTCGGCTTCGGGTTGATCCCCGTGGTGCGTCCGGA > 1:174421/1‑145 GGATCAAGATTCTTCAGGAGGCGGACATCGGCGACCGCCGCAACCAGCTGTTGGTTGCCGTGAGCGTCGGCTTCGGGTTGATCCCCGTGGTGCGTCCGGAGTTCTTTGCCCAGATGCCACAGTGGATGGAGCCCATCACCCACAGCGG > 7:213556/1‑148 CACCACGGGGATCAACCCGAAGCCGACGCTCACGGCAACCAACAGCTGGTTGCGGCGGTCGCCGATGTCCGCCTCCTGAAGAATCTTGATCCCGGTGGCGGTGACCATGCCGAACATGGCGATGGACGCGCCGCCCAGTACTGCGGGCGGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4882114‑4881961 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggatcAAGATTCTTCAGGAGGCGGACATCGGCGACCGCCGCAACCAGCTGTTGGTTGCCGTGAGCGTCGGCTTCGGGTTGATCCCCGTGGTGCGTCCGGAGTTCTTTGCCCAGATGCCACAGTGGATGGAGCCCATCACCCACAGCGG > NC_002947/4882028‑4882170 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |