| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4915929 = | 54 (0.980) | 3 (0.060) | 3/240 | NT | 6.6% | coding (159/768 nt) | ccmC | protoheme IX reservoir complex subunit |
| ? | NC_002947 | 4915983 = | 35 (0.670) | coding (105/768 nt) | ccmC | protoheme IX reservoir complex subunit | |||||
AAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCGTGGCTGGCCGGTGCTGCCGTGCTCCTGCTGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTACCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4916084‑4915929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcagCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGTGGAACCACGTCCAGCTTATTTTCATCAGGGTACATCCAGGGTATTTGCCGGGCTTGAGAGCCCGGGAC > NC_002947/4915983‑4916130 AAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCGTGGCTGGCCGGTGCTGCCGTGCTCCTGCTGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTA > 6:245768/1‑149AAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCGTGGCTGGCCGGTGCTGCCGTGCTCCTGCTGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTA > 8:32793/1‑149 tAATACGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGCTTCTAAGCCTTCAGCGGCCGCATGCTGCCGTGGCTGGCCGGTGCTGCCGTCCTCCTGCTGCTTCTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTAC < 1:291517/148‑1 GCTGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTACCAGCAGCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGTGGAACCACGTCCAG > 5:238055/1‑149 TGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTACCAGCAGCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGT < 3:52701/133‑1 TGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTACCAGCAGCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGT > 4:52701/1‑133 CAGCAGCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGTGGAACCACGTCCAGCTTATTTTCATCAGGGTACATCCAGGGTATTTGCCGGGCTTG < 1:342096/142‑1 CAGCAGCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGTGGAACCACGTCCAGCTTATTTTCATCAGGGTACATCCAGGGTATTTGCCGGGCTTG > 2:342096/1‑142 AGCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGTGGAACCACGTCCAGCTTATTTTCATCAGGGTACATCCAGGGTATTTGCCGGGCTTGAGAGCCCGGGA < 5:145196/149‑1 GCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGTGGAACCACGTCCAGCTTATTTTCATCAGGGTACATCCAGGGTATTTGCCGGGCTTGAGAGCCCGGGAC < 3:338878/149‑1 GCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGTGGAACCACGTCCAGCTTATTTTCATCAGGGTACATCCAGGGTATTTGCCGGGCTTGAGAGCCCGGGAC > 5:54106/1‑149 AAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCGTGGCTGGCCGGTGCTGCCGTGCTCCTGCTGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTACCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4916084‑4915929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcagCAGGAGCACGGCAGCACCGGCCAGCCACGGCAGCATGCGGCCGCTGATGGCATAGAACCATTTCGGGGAGCCCAGCTTGTGGAACCACGTCCAGCTTATTTTCATCAGGGTACATCCAGGGTATTTGCCGGGCTTGAGAGCCCGGGAC > NC_002947/4915983‑4916130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |