| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5811343 = | 55 (0.990) | 4 (0.080) | 4/244 | NT | 7.9% | coding (671/2220 nt) | priA | primosome assembly protein |
| ? | NC_002947 | 5811376 = | 41 (0.780) | coding (704/2220 nt) | priA | primosome assembly protein | |||||
TCTCCGGGATCAGCACCAGCGCCTGCTTGCCGGCTTCCAGGGTTTCACGGATCAGTTGCAGGTAGACCTCGGTCTTGCCACTGCCGGTGACGCCGGCCAGCAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5811447‑5811343‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagaCCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCAAACCCTGGCCCGCTTCGAGCAACGCTTCAACGCGCGCATTGCCCTGCTGCACTCTGCGG > NC_002947/5811376‑5811522 TCTCCGGGATCAGCACCAGCGCCTGCTTGCCGGCTTCCAGGGTTTCACGGATCAGTTGCAGGTAGACCTCGGTCTTGCCACTGCCGGTGACGCCGGCCAGCAA > 1:52514/1‑103TCTCCGGGATCAGCACCAGCGCCTGCTTGCCGGCTTCCAGGGTTTCACGGATCAGTTGCAGGTAGACCTCGGTCTTGCCACTGCCGGTGACGCCGGCCAGCAA < 2:52514/103‑1 CCTCGGTCTTGCCACTGCCGGTGACGCCGGCCAGCAAGACCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCAAACCCTGGCCCGCTTCGAGCAA > 6:36597/1‑149 GGTCTTGCCACTGCCGGTGACGCCGGCCAGCAAGACCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCAAACCCTGGCCCGCTTCGA > 5:278325/1‑141 GGTCTTGCCACTGCCGGTGACGCCGGCCAGCAAGACCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCAAACCCTGGCCCGCTTCGA < 6:278325/141‑1 GCCACTGCCGGTGACGCCGGCCAGCAAGACCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCAAACCCTGGCCCGCTTCGAGCAACGCTTCA < 5:36597/146‑1 GCAAGACCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCCAACCCTGGCCCGCTTCGAGCAACGCTTCAACGCGCGCATTGCCCTGCTGCACACT > 5:146894/1‑149 CAAGACCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCAAACCCTGGCCCGCTTCGAGCACCGCTTCAACGCGCGCATTGCCCTGCTGCACTCTG > 2:320311/1‑149 GACCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCAAACCCTGGCCCGCTTCGAGCAACGCTTCAACGCGCGCATTGCCCTGCTGCACTCTGCGG > 4:305714/1‑149 TCTCCGGGATCAGCACCAGCGCCTGCTTGCCGGCTTCCAGGGTTTCACGGATCAGTTGCAGGTAGACCTCGGTCTTGCCACTGCCGGTGACGCCGGCCAGCAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5811447‑5811343‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagaCCGAGGTCTACCTGCAACTGATCCGTGAAACCCTGGAAGCCGGCAAGCAGGCGCTGGTGCTGATCCCGGAGATCAACCTCGGCCCGCAAACCCTGGCCCGCTTCGAGCAACGCTTCAACGCGCGCATTGCCCTGCTGCACTCTGCGG > NC_002947/5811376‑5811522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |