New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	137328 =	39 (0.700)	3 (0.060)	3/240	NT	7.4%	coding (229/1608 nt)	PP_0131	membrane‑anchored phosphodiesterase
	?	NC_002947	137388 =	39 (0.750)					coding (289/1608 nt)	PP_0131	membrane‑anchored phosphodiesterase

CAGCGCCGCGGTGTTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGC  >  NC_002947/137183‑137470                                                                                                                                                   |                                                                                                                                               cAGCGCCGCGGTGTTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATctgc                                                                                                                                             <  3:151830/149‑1 (MQ=255)            tgtTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGATCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCaa                                                                                                                                  >  7:169528/1‑149 (MQ=255)            tgtTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCaa                                                                                                                                  <  5:172394/149‑1 (MQ=255)                  tctctGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCAAACCCTTg                                                                                                                            >  6:220831/1‑149 (MQ=255)                    tctGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCGCAACCCTTgcg                                                                                                                          >  6:241154/1‑149 (MQ=255)                        ccAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTgcgc                                                                                                                         <  3:100917/146‑1 (MQ=255)                        ccAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGc                                                                                                                      >  2:205802/1‑149 (MQ=255)                                   aTTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGc                                                                                                           <  5:241154/149‑1 (MQ=255)                                         cTGCAACAAATGAAACAAAGCGAAAGCGATCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGtt                                                                                                     <  8:169528/149‑1 (MQ=255)                                               caaATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGGAGGGGTCGATCTGCTGCAGGCCCAACCC‑TGCGCGGCTGCAGCCCGGCAATGTTGGCAGcc                                                                                              >  1:325259/1‑149 (MQ=255)                                                 aaTGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATctgct                                                                                                                                            <  4:336416/102‑1 (MQ=255)                                                 aaTGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATctgct                                                                                                                                            >  3:336416/1‑102 (MQ=255)                                                 aaTGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCt                                                                                             >  4:185351/1‑149 (MQ=255)                                                  aTGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCtt                                                                                            <  1:205802/149‑1 (MQ=255)                                                           agcgaaagcgaaCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATg                                                                                                       >  1:239006/1‑129 (MQ=255)                                                           agcgaaagcgaaCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATg                                                                                                       <  2:239006/129‑1 (MQ=255)                                                               aaagcgaaCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGc                                                                               <  5:61292/149‑1 (MQ=255)                                                                gctcgctcatcaccgcggttggagcaggcaacattgccatctacataagccgcttcatagatgaaccgcgagttcaggccaacCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGcagcag                                                                                     <  3:320973‑M1/60‑1 (MQ=255)                                                                    gaaCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGTTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCgg                                                                                                            <  8:321403/115‑1 (MQ=255)                                                                    gaaCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCgg                                                                                                            >  7:321403/1‑115 (MQ=255)                                                                    gaaCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGtt                                                                                                     <  6:151450/122‑1 (MQ=255)                                                                    gaaCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGtt                                                                                                     >  5:151450/1‑122 (MQ=255)                                                                      tcatcaccgcggttggagcaggcaacattgccatctacataagccgcttcatagatgaaccgcgagttcaggccaacCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTgcagc                                                                                       <  3:159858‑M1/58‑1 (MQ=255)                                                                      tcatcaccgcggttggagcaggcaacattgccatctacataagccgcttcatagatgaaccgcgagttcaggccaacCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTgcagc                                                                                       >  4:159858‑M1/78‑135 (MQ=255)                                                                          aTGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTcgcg                                                                    >  1:326771/1‑149 (MQ=255)                                                                          aTGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCATGCAGCACGATGGCCTGAACTcgcg                                                                    >  2:170228/1‑149 (MQ=255)                                                                                 cccAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGGAGGGGTCGATCTGCTGCAGGCCCAACCC‑TGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATc                                                             <  2:325259/148‑1 (MQ=255)                                                                                  ccAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATc                                                             >  7:37166/1‑148 (MQ=255)                                                                                       gCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGaa                                                       <  2:326771/149‑1 (MQ=255)                                                                                                 tCTGGAACGGCTCGAACAGGTGTTCG‑GCAAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATg                                             >  2:55151/1‑149 (MQ=255)                                                                                                          ggccGAACACCTGTTCGAGCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATgg                                      >  8:231533/4‑148 (MQ=255)                                                                                                          gCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGc                                     >  4:272488/1‑148 (MQ=255)                                                                                                          gCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGACTTGCAGCAGGTTGGCCTGATCTCGCGGTTCATCTATGAAGCGGCTTAGGTAGATGGc                                     >  4:267681/1‑148 (MQ=255)                                                                                                            tCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAAt                                  >  1:101949/1‑149 (MQ=255)                                                                                                                 cAGGTGTTCG‑GCCAACAGCCCCAAGGGGTCGATCTGCTGCAGCCCCAACCCTAGCGCGGCTCCAGCCCGGCAATGTTGGCAGCCTTGCACCACGATGCCCTCAACTCGCGGATCATCTATGAAGCGGCTTAAGTACATGGCaaactacc                             >  2:85025/1‑143 (MQ=255)                                                                                                                          g‑gCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAATGTTGCCTGCTCCaa                    >  5:245462/1‑149 (MQ=255)                                                                                                                             ccAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTcgc                                                                     >  4:251653/1‑98 (MQ=255)                                                                                                                             ccAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTcgc                                                                     <  3:251653/98‑1 (MQ=255)                                                                                                                                 cTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAACAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAATGTTGCCTGCTCCAACCGCgg              <  5:325616/149‑1 (MQ=255)                                                                                                                                     gcgAAGGTGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAATGTTGCCTGCTCCAACCGCGGtgat          <  3:185351/149‑1 (MQ=255)                                                                                                                                     gcgAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAATGTTGCCTGCTCCAACCGCGGtgat          >  2:237051/1‑149 (MQ=255)                                                                                                                                        aaGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAATGTTGCCTGCTCCAACCGCGGTGATgag       <  5:220831/149‑1 (MQ=255)                                                                                                                                          ggggTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGAt                                        <  7:319447/114‑1 (MQ=255)                                                                                                                                          ggggTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGAt                                        >  8:319447/1‑114 (MQ=255)                                                                                                                                             gTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAATGTTGCCTGCTCCAACCGCGGTGATgagcgagc  >  2:46615/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                               CAGCGCCGCGGTGTTGCTCTCTGCCAGCATCGGCATTGCCCTGCAACAAATGAAACAAAGCGAAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATGGCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGC  >  NC_002947/137183‑137470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.