New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	137328 =	39 (0.700)	3 (0.060)	3/240	NT	7.4%	coding (229/1608 nt)	PP_0131	membrane‑anchored phosphodiesterase
	?	NC_002947	137388 =	39 (0.750)					coding (289/1608 nt)	PP_0131	membrane‑anchored phosphodiesterase

AAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGCCGACGTACAGCTACTGGCTT  >  NC_002947/137245‑137525                                                                                                                                                 |                                                                                                                                           aaagcgaaCAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGc                                                                                                                                       <  5:61292/149‑1 (MQ=255)            aTGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTcgcg                                                                                                                            >  1:326771/1‑149 (MQ=255)            aTGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCATGCAGCACGATGGCCTGAACTcgcg                                                                                                                            >  2:170228/1‑149 (MQ=255)                   cccAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGGAGGGGTCGATCTGCTGCAGGCCCAACCC‑TGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATc                                                                                                                     <  2:325259/148‑1 (MQ=255)                    ccAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATc                                                                                                                     >  7:37166/1‑148 (MQ=255)                         gCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGaa                                                                                                               <  2:326771/149‑1 (MQ=255)                                   tCTGGAACGGCTCGAACAGGTGTTCG‑GCAAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATg                                                                                                     >  2:55151/1‑149 (MQ=255)                                            ggccGAACACCTGTTCGAGCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATg‑g                                                                                             >  8:231533/4‑148 (MQ=255)                                            gCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑Gc                                                                                            >  4:272488/1‑148 (MQ=255)                                            gCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGACTTGCAGCAGGTTGGCCTGATCTCGCGGTTCATCTATGAAGCGGCTTAGGTAGATG‑Gc                                                                                            >  4:267681/1‑148 (MQ=255)                                              tCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAAt                                                                                         >  1:101949/1‑149 (MQ=255)                                                   cAGGTGTTCG‑GCCAACAGCCCCAAGGGGTCGATCTGCTGCAGCCCCAACCCTAGCGCGGCTCCAGCCCGGCAATGTTGGCAGCCTTGCACCACGATGCCCTCAACTCGCGGATCATCTATGAAGCGGCTTAAGTACATG‑GCaaactacc                                                                                    >  2:85025/1‑143 (MQ=255)                                                            g‑gCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCaa                                                                           >  5:245462/1‑149 (MQ=255)                                                               ccAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTcgc                                                                                                                             <  3:251653/98‑1 (MQ=255)                                                               ccAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTcgc                                                                                                                             >  4:251653/1‑98 (MQ=255)                                                                   cTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAACAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCgg                                                                     <  5:325616/149‑1 (MQ=255)                                                                       gcgAAGGTGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGtgat                                                                 <  3:185351/149‑1 (MQ=255)                                                                       gcgAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGtgat                                                                 >  2:237051/1‑149 (MQ=255)                                                                          aaGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATgag                                                              <  5:220831/149‑1 (MQ=255)                                                                            ggggTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGAt                                                                                                <  7:319447/114‑1 (MQ=255)                                                                            ggggTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGAt                                                                                                >  8:319447/1‑114 (MQ=255)                                                                               gTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATgagcgagc                                                         >  2:46615/1‑149 (MQ=255)                                                                                     ctgctgcaaggctgccaacattgccgggctgcagccgcgcaagggttgggcctgcagcagGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATgagcgagc                                                         <  3:320973‑M2/83‑1 (MQ=255)                                                                                       gctgcaaggctgccaacattgccgggctgcagccgcgcaagggttgggcctgcagcagGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGtgatga                                                               <  3:159858‑M2/77‑1 (MQ=255)                                                                                       gctgcaaggctgccaacattgccgggctgcagccgcgcaagggttgggcctgcagcagGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGtgatga                                                               >  4:159858‑M2/59‑135 (MQ=255)                                                                                        CTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGcgttcgtt                                                  >  2:101949‑M1/1‑147 (MQ=255)                                                                                          GCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCt                                              <  7:206458‑M1/149‑1 (MQ=255)                                                                                           CAGGCCCAACCCTTTCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCtt                                             >  1:170228‑M1/1‑149 (MQ=255)                                                                                           CAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCt                                                                                                                    >  5:81629‑M1/1‑79 (MQ=255)                                                                                           CAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCt                                                                                                                    <  6:81629‑M1/79‑1 (MQ=255)                                                                                           CAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTccc                                               >  1:55151‑M1/1‑147 (MQ=255)                                                                                            aGGGCCAACCCTTGCGCTGGTGCAGCCCGTCAATGTTGGCAGCGTTGCAGCATGTTGGGATGTACTCGGGGTTCATCTATGAAGCGGCTTATGTAGATGCGCATTGTTGCCTGGTCCAAGCGCTGTTATTAGGGAGCGTTCGTTCCCtt                                             <  1:85025/149‑1 (MQ=255)                                                                                              gCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCg                                          <  1:237051/149‑1 (MQ=255)                                                                                                ccAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCggg                                        >  6:39286/1‑149 (MQ=255)                                                                                                ccAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCggg                                        >  6:44641/1‑149 (MQ=255)                                                                                                ccAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCggg                                        <  2:149116/149‑1 (MQ=255)                                                                                                         gcgcGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGat                                <  5:39286/148‑1 (MQ=255)                                                                                                         gcgcGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGat                                <  5:44641/148‑1 (MQ=255)                                                                                                                 gCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAgggg                       >  1:319170/1‑149 (MQ=255)                                                                                                                     cccGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGCCGa                   >  6:105389/1‑149 (MQ=255)                                                                                                                        ggCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGc                      <  4:84293/143‑1 (MQ=255)                                                                                                                        ggCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGc                      >  3:84293/1‑143 (MQ=255)                                                                                                                             tGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGCCGACGTACAGc           <  8:37166/149‑1 (MQ=255)                                                                                                                                tGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGCCGACGTACAGCTa         <  1:46615/148‑1 (MQ=255)                                                                                                                                 ggCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATg                                                                                        >  6:183717/1‑68 (MQ=255)                                                                                                                                 ggCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATg                                                                                        <  5:183717/68‑1 (MQ=255)                                                                                                                                   cAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGCCGACGTACAGCTACTgg     <  8:206458/149‑1 (MQ=255)                                                                                                                                   cAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGCCGACGTACAGCTACTgg     >  1:124411/1‑149 (MQ=255)                                                                                                                                      ccTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGCCGACGTACAGCTACTGGCtt  <  2:124411/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                           AAAGCGAACAGATGAATGCCCAGGGCGAGCGTTTTCTGGAACGGCTCGAACAGGTGTTCG‑GCCAACTGCGCGAAGGGGTCGATCTGCTGCAGGCCCAACCCTTGCGCGGCTGCAGCCCGGCAATGTTGGCAGCCTTGCAGCAGGTTGGCCTGAACTCGCGGTTCATCTATGAAGCGGCTTATGTAGATG‑GCAATGTTGCCTGCTCCAACCGCGGTGATGAGCGAGCGTTCGTTCCCTTGCGGGCGCCAGATATCCAGGGGCCGACGTACAGCTACTGGCTT  >  NC_002947/137245‑137525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.